Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2328 ATGTCCAGCTCGTCGGAGTACTCTGAATTTTCCGGCCAGAAACCGGCCAAGTCGCCGGAGAAGTCCAGCTTCTCTCAAACTTGCAGTCTCTTGAGTCAATACATCAAGGAGAAGGGTAGCTTTGGAGATCTCACCCTCGGCATGACATGCAACACCGAACCATCTGGGTCACCTGAGACGTCATGTCAATCTGGTACAACTATGAACTTGTTTCCTACCAAGGAAAACAACGTGACACCAAAGAACCTGACAGCCATGGATTTGCTCTCTCCACAAGCTTCCTATCGTCCTTTAGAGGAGATTCCAACCTTGGTCAATTCCAGTGCAATTAAGTCTGTGAGCAAGGTTAACAAAACTGCACAGATGACAATCTTTTATGGTGGACAAGTTGTTGTGTTTGATGATTTTCCTGCTGAGAAAGCAAATGAGATCATGTCCTATGCTAGAGGGAAACCACAGAGCCAGAACAATTCTGTTTTCACATACACACAGAGCCAGCCTTCATTTCCTTCTAATCTGGTCAGAACTTCTGCTGATTCAAGTGCTCCAATTATTCCCTCTGTGAATGTTACCAACTCCATCCATGAACACTCTCAAGCACCATCCAGGCCTGTTGTTTGTGATCCACCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTCTTGAAGAGAAAGGATAGAATTGCCTCCAAAGCTCCATATCAAGTACCAAACGGGGTTTCAGCTGAGTCCATGCCATGGCTTGGGTTGAGTGCTACATCACCTAAAATCTGA 774 0.4561 MSSSSEYSEFSGQKPAKSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTCNTEPSGSPETSCQSGTTMNLFPTKENNVTPKNLTAMDLLSPQASYRPLEEIPTLVNSSAIKSVSKVNKTAQMTIFYGGQVVVFDDFPAEKANEIMSYARGKPQSQNNSVFTYTQSQPSFPSNLVRTSADSSAPIIPSVNVTNSIHEHSQAPSRPVVCDPPIARKASLHRFLLKRKDRIASKAPYQVPNGVSAESMPWLGLSATSPKI* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2328 257 ProSiteProfiles Tify domain profile. 115 150 IPR010399 -
Pvu9g2328 257 Pfam Jas motif 210 235 IPR018467 -
Pvu9g2328 257 PANTHER PROTEIN TIFY 10A 17 251 - -
Pvu9g2328 257 SMART tify_2 115 150 IPR010399 -
Pvu9g2328 257 MobiDBLite consensus disorder prediction 1 23 - -
Pvu9g2328 257 Pfam tify domain 118 148 IPR010399 -
Pvu9g2328 257 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 251 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2328 Pvu-Chr9 33382045 33384461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2328 1 252 Tify Gene Family AT1G19180 41.948 4.92e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pvu9g2328 tify 7.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2328 K13464 - gmx:100801449 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2328 9 33382045 33384461 Pvu9g2328 9 33382045 33384461 ECH
Pvu3g1340 3 31709149 31711390 Pvu9g2328 9 33382045 33384461 PCT