Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2322 ATGAAGGCTCCTCCAAATGGCTACTTGCCTAATTCCAGCGAAGGGGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCACTGGTTTCCTTACCTCCTGTTGGAAGTCTTGTGGTTTACTTTCCTCAAGGACACAGTGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGACTTCGTTCCCAGTTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCTCTTCACGCTGATCCTGAAACTGATGAGGTCTATGCGCAGATGACCCTTCAACCTGTTACTAAATATGACAAGGAAGCAATATTGGCATCTGACATGGGTCTCAAACAAAACCAACAACCTACCGAGTTCTTTTGCAAAACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTGCCCCGTAGAGCAGCTGAGAAAATATTCCCCCTTCTGGATTTTTCAATGCAACCTCCAGCTCAGGAGATTGTTGCCAAAGATTTGCATGACAGTACATGGACATTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTATTGACTACCGGTTGGAGTGTCTTTGTTAGCACAAAAAGGCTGTTTGCTGGAGATTCAGTTCTCTTTATCAGGGATGAAAAACAACAACTTCTTTTAGGAATAAAGAGAGCTAACAGACAGCAACCAGCACTATCTTCATCAGTAATATCCAGTGACAGCATGCACATTGGCATTCTTGCCGCTGCAGCTCATGCTGCTTCAAATAACAGTCCATTTACTATATTTTATAATCCAAGGGCCAGCCCCTCTGAATTTGTAATTCCATTGGCCAAGTATAATAAAGCCCTCTACAATCAAGTTTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACCGAGGAGTCAGGGGTACGCAGACATATGGGTACAATCACTGGGATCAGTGACTTGGATCCTGTCAGATGGAAGAATTCACAATGGCGCAATCTTCAGGTTGGATGGGATGAATCAACGGCTGGTGAGCGCCCAAGCAGAGTTTCAATTTGGGATATTGAACCAGTAGTGACTCCTTTCTACATTTGTCCACCTCCATTTTTTAGGCCAAAGTTCCCTAAGCAGCCAGGAATGCCAGATGATGATTCTGATATAGAAAATGCTTTCAAGAGAGCTATGCCCTGGCTTGGAGATGACCTTGGGATGAAGGATGCCTCAAGTTCAATCTTCCCAGGTTTGAGTTTGGTGCAATGGATGAGCATGCAGCAGAATAATCAGTTCTCCGGTGTCCAATCTGGATTTATGCCGCCATCCATGCTTTCATCCAATGCACTGCATGGTAACCTTCCCACTGATGATCCATCCAAATTATTGAACTTTCAAGCTCCTGTCCTCTCTTCACCAAATCTACAATTTAACAAACCTAACTTACCAAACCAAGTCAACCAATTGCAACAACCCCCAACATCATGGCCTCCACAGCAGCAACAACAGAAGCTGCAGTCATTGATGCCAACACCCTTAAACCCGCTCCAACAGCAGCAACAGAGGCAACAACAGCTTCCTGTACTGCAAAACCTGTCACAACCACAGCAACAACAGCCCCAAATGTCCCAACAGAGAGCACAACAGCCACAACAGCAGCAGCAGCAGTCATGTCAACAGACCATCATGAATAATGGGGCAGTTTCTTCCAACCAGATTCCAAATCAGTGTGTGCAGCAACCAGTGACATACTCCCAGCTTCAGCAACAGCAATTACTCTCAGGAAATATCCCACCCCAACAAAGTTTTCAATCACCCAACAAGAATACATTGTTGATGACATCCTTACCGCAAGACTCTCAGTTTCAACAACAAATAGACCAGCAAGCTAGTCTCTTACAGAGGCAGCAGCAGCAGACACAGTTGCAATCATCTCCATTGCAGTTATTGCAACAAAGCTTGTCACAGAGGGCACCACAGCAACCACAAATGACACAAATGTCACAGCAAAACAGCTCAGAGCAACAACCACAGTTGCAGTTGCTCCAGAAATTGCAGCAGCAACAACAACAGCAGCAACAACAACAACAGCAACAACAACAACAACTCCTTTCCACTTCTAGCCCACTTTTGCAGTCTCAGCTTCTACAGCAACAAAATACTCATCAACAAAACCAGCAATTACCGCAGCTGCCTCTATCACAGTGTCATCAGGCTCAACAGCTTGGCAACAATGCTTTCTCAATGGAGAAGCTTTTCAATGGCAACAACTACTCTTCTTCGTCTCTGATGCAAACACAGCAGCTTCCTGTGAACCAATCCCATAATACACAGAAATCATTAACTAATACTAGAGCTCCTTCAACTCTTACAGATGGAGATGCCCCATCATGCTCAACTTCACCATCTACGAATAACTGCCAGATATCTCCTTCAAATCTGATTAAAAGAAATCAACAGGTACCAACCACATTAGGAGGACCTTCGGTAGTTGAACCTACCAATCATTTGATACAGGAGCTTCATAGAAAGTCTGAGATGCAGATCAAACACGAATTACCCAGTGTAAGAGGACCTGACCAGCTGAAGTGCAAGGGGACAATTGCTGATCAGATGGAAGCTTCTTCTGGAACATCTTACTCTATTGATCCTAATAATATCCATCAGAACTTCCCACTTCCCAGTTTCTGCATGGACGGTGATGTCCAATCACACCCAAGAAATAATCTTCCATTTGCCTCTAATCTTGATGGATTAACACCTGATACTTTGCTCTCAAGAGGGTATGATTCTCAAAAAGATCTTCAAAACTTGCTGTCCAATTATGGTGGTGCTCCAAGAGACATTGAAACTGAACTGTCCACTGCTGCCATTACTTCGCAGCCATTTGGGGTGCCAGACATGCCTTTTAAGCCTGGATGCTCCAGTGATATTGCCATCAATGATCCTGGGGTTTTGAATAATGGCTTGTGGGCTAGTCAGACTCAAAGAATGAGGACATATACTAAGGTTCAAAAATGTGGCTCTGTTGGAAGATGTATTGATGTCACCCGTTACAAGGGATATGATGAACTCCGAAATGATTTGGCTAGGATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACAGAGTGGAAACTAGTCTACGTAGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAGGTACAGCAAATGAGCTTGGATGGAGATTTAGGCCATGTTCCAGTCCCCAATCAAGCTTGTAGTGGGACAGATAATGGAAATGCATGGAGGGGACAGTATGATGATAACTCTGCAGCCTCGTTTAATCGATAA 3369 0.4411 MKAPPNGYLPNSSEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFVPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVTKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPLLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALYNQVSLGMRFRMMFETEESGVRRHMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPDDDSDIENAFKRAMPWLGDDLGMKDASSSIFPGLSLVQWMSMQQNNQFSGVQSGFMPPSMLSSNALHGNLPTDDPSKLLNFQAPVLSSPNLQFNKPNLPNQVNQLQQPPTSWPPQQQQQKLQSLMPTPLNPLQQQQQRQQQLPVLQNLSQPQQQQPQMSQQRAQQPQQQQQQSCQQTIMNNGAVSSNQIPNQCVQQPVTYSQLQQQQLLSGNIPPQQSFQSPNKNTLLMTSLPQDSQFQQQIDQQASLLQRQQQQTQLQSSPLQLLQQSLSQRAPQQPQMTQMSQQNSSEQQPQLQLLQKLQQQQQQQQQQQQQQQQQLLSTSSPLLQSQLLQQQNTHQQNQQLPQLPLSQCHQAQQLGNNAFSMEKLFNGNNYSSSSLMQTQQLPVNQSHNTQKSLTNTRAPSTLTDGDAPSCSTSPSTNNCQISPSNLIKRNQQVPTTLGGPSVVEPTNHLIQELHRKSEMQIKHELPSVRGPDQLKCKGTIADQMEASSGTSYSIDPNNIHQNFPLPSFCMDGDVQSHPRNNLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAITSQPFGVPDMPFKPGCSSDIAINDPGVLNNGLWASQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRNDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGHVPVPNQACSGTDNGNAWRGQYDDNSAASFNR* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2322 1122 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pvu9g2322 1122 MobiDBLite consensus disorder prediction 470 501 - -
Pvu9g2322 1122 MobiDBLite consensus disorder prediction 1100 1122 - -
Pvu9g2322 1122 ProSiteProfiles PB1 domain profile. 995 1088 IPR000270 GO:0005515
Pvu9g2322 1122 Gene3D - 123 227 IPR015300 -
Pvu9g2322 1122 CDD B3_DNA 125 217 IPR003340 GO:0003677
Pvu9g2322 1122 SUPERFAMILY CAD & PB1 domains 1009 1073 - -
Pvu9g2322 1122 Coils Coil 674 698 - -
Pvu9g2322 1122 Gene3D - 289 360 - -
Pvu9g2322 1122 MobiDBLite consensus disorder prediction 649 677 - -
Pvu9g2322 1122 MobiDBLite consensus disorder prediction 766 809 - -
Pvu9g2322 1122 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Pvu9g2322 1122 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Pvu9g2322 1122 SMART B3_2 126 228 IPR003340 GO:0003677
Pvu9g2322 1122 Gene3D - 990 1084 - -
Pvu9g2322 1122 Pfam AUX/IAA family 993 1081 IPR033389 -
Pvu9g2322 1122 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Pvu9g2322 1122 MobiDBLite consensus disorder prediction 527 553 - -
Pvu9g2322 1122 PANTHER AUXIN RESPONSE FACTOR 19 1 1110 - -
Pvu9g2322 1122 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1110 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2322 Pvu-Chr9 33279497 33287731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2322 1 487 B3 DNA Binding Superfamily AT1G19220 83.368 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pvu9g2322 AUX_IAA 2.8e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2322 K14486 - gmx:100804628 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2322 9 33279497 33287731 Pvu9g2322 9 33279497 33287731 ECH
Pvu3g1336 3 31626370 31634158 Pvu9g2322 9 33279497 33287731 PCT