Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2321 ATGGTGACGAAGAAGCTTAGCGAGGGAGTGAAAAGCGAGGGTAATGGCAGCAACGACAACGTTTTTGCTTCATGCTCCTTCTCCAGCCTTGGCCTTGATTCCAATTTGTGTGAACAACTTCGTGAGAGGTTGGGGTTTGAAGTTCCGACGCAGGTGCAAGCTCAAGCGATTCCTGTTATTCTCTCTGGGCGTCATGCATTGGTAAATGCTGCAACGGGCACGGGGAAGACTGCTGCTTATCTCGCTCCGATTGTTCATCACTTGCAGGGTTATGAAAATCGCATTCAGCGCTCTGACGGGACATTTGCGTTGGTTCTTGTACCAACGCGTGAGCTATGTTTGCAGGTTTATGAAATTCTTCAGAAGTTATTGCATCGGTTTCATTGGATTGTTCCAGGATACATTATGGGTGGAGAAAATAGATCAAAGGAGAAAGCCAGGCTGCGCAAAGGAATATCAATTCTAATAGCAACTCCTGGGCGTCTTTTGGATCACTTAAAGAATACAACATCATTCTTGCACTCAAATCTGCGCTGGATAATTTTTGATGAAGCTGATCGGATTTTGGAATTAGGATTTGGAAAAGATATAGAGGAAATACTAGATCTTTTAGGTTCGAGGAAAACACTGCATGATGACCAAGAGAATACAGTTCCAAGAAACTCTAAAATTCAAAGACAGAATTTGCTTTTATCTGCTACCTTAAACGAGAAAGTGAACCACCTTGCTAAAATTAGTCTGGAAAATCCAGTGATGGTTGGTCTTGATGTGAAGAAAATAGAACAAATTTCAACGCCTGTAAGCAATGATCATTCAGAATCTGATGAAGATAATGAAGACCAGTATTCCAGTAAAATGCCAACAGTTGGAGATTACAAAGTTCCTATACAGTTGATTCAGAGATACATGAAAGTGCCTTGTGGTACACGGCTACCTGTACTTCTTTCAATTTTAAAGCATCTCTTTGAAAGGGAACCTTCACAAAAGGTTGTTGTATTCTTTTCAACATGCGATGCTGTAGATTTTCACTATTCACTGTTAAGTGAATTTCAATTTTCATCCCATTCACAAGCAGAAGGGACCCGACAGAAGTTTCTTGGATGCAAAATTTTTCGGTTACATGGTAATATGGTGCAGGAGGACCGGAGAACCAGTTTTCAGACCTTTAAAACTGAGAAATCTGCTTTACTTTTGACTAGTGATGTTTCTGCTAGAGGCCTGGATATTCCCAAGGTTAGATGCATCATACAATATGATTCTCCTGGGGAAGCTACGGAATATGTTCATAGGGTTGGTAGAACTGCTCGACTGGGTGAAAAAGGAGAGTCGTTGCTTTTTCTGCAACCAGTTGAGATAGACTATTTACAGGAGTTGGAAACACATGGTGTCTCACTCACAGAGTGTCCTGTCCTCAAAGTGTTGGATAGTTTTCCACTATATGGACAAAAGAACTACATAAAGAAGTCAGTGTTCTTAGATTCACATCCCTGGGTCCTTTGTCTCCAGAAGGCACTTGAAGCTTTCATCATGTCGAAGCCCGAGGTGGATAAACTTGCTAAGAAGGCATTTTGCTCGTGGGTTCGCGCATACGCTGCCCATCGTGGTGAGTTGAAAAGAATATTTATGATCAAGAAACTTCACTTGGGGCACGTAGCAAAAAGCTTTGCATTGAAACAACAACCTTCCTTAGTTGGACAGTCATTCCAAAAGCAAGAAAAGAAAAGAAAGCGATTTGAGAAGAAAACTGGGTTCTCAAAAAAGAGAAAAGTTGCGAGTGTGAGAGAACGCAGACCATGA 1797 0.4151 MVTKKLSEGVKSEGNGSNDNVFASCSFSSLGLDSNLCEQLRERLGFEVPTQVQAQAIPVILSGRHALVNAATGTGKTAAYLAPIVHHLQGYENRIQRSDGTFALVLVPTRELCLQVYEILQKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKNTTSFLHSNLRWIIFDEADRILELGFGKDIEEILDLLGSRKTLHDDQENTVPRNSKIQRQNLLLSATLNEKVNHLAKISLENPVMVGLDVKKIEQISTPVSNDHSESDEDNEDQYSSKMPTVGDYKVPIQLIQRYMKVPCGTRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLSEFQFSSHSQAEGTRQKFLGCKIFRLHGNMVQEDRRTSFQTFKTEKSALLLTSDVSARGLDIPKVRCIIQYDSPGEATEYVHRVGRTARLGEKGESLLFLQPVEIDYLQELETHGVSLTECPVLKVLDSFPLYGQKNYIKKSVFLDSHPWVLCLQKALEAFIMSKPEVDKLAKKAFCSWVRAYAAHRGELKRIFMIKKLHLGHVAKSFALKQQPSLVGQSFQKQEKKRKRFEKKTGFSKKRKVASVRERRP* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2321 598 SMART helicmild6 356 438 IPR001650 -
Pvu9g2321 598 MobiDBLite consensus disorder prediction 265 286 - -
Pvu9g2321 598 Gene3D - 310 591 IPR027417 -
Pvu9g2321 598 SMART ultradead3 45 263 IPR014001 -
Pvu9g2321 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 454 IPR027417 -
Pvu9g2321 598 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 25 54 IPR014014 GO:0003724
Pvu9g2321 598 CDD SF2_C_DEAD 298 447 - -
Pvu9g2321 598 PANTHER RNA HELICASE 14 592 - -
Pvu9g2321 598 CDD DEADc_DDX31 36 254 - -
Pvu9g2321 598 MobiDBLite consensus disorder prediction 566 598 - -
Pvu9g2321 598 Pfam Domain of unknown function (DUF4217) 502 562 IPR025313 -
Pvu9g2321 598 Pfam Helicase conserved C-terminal domain 316 438 IPR001650 -
Pvu9g2321 598 SMART DUF4217_3 500 565 IPR025313 -
Pvu9g2321 598 Gene3D - 3 256 IPR027417 -
Pvu9g2321 598 PANTHER ATP-DEPENDENT RNA HELICASE DDX31-RELATED 14 592 - -
Pvu9g2321 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 253 IPR027417 -
Pvu9g2321 598 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 313 485 IPR001650 -
Pvu9g2321 598 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 181 189 IPR000629 -
Pvu9g2321 598 Pfam DEAD/DEAH box helicase 50 241 IPR011545 GO:0003676|GO:0005524
Pvu9g2321 598 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 57 253 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2321 Pvu-Chr9 33231316 33238082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2321 17 470 Eukaryotic Initiation Factors Gene Family AT3G19760 24.729 3.82e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2321 K14806 - gmx:100805157 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2321 9 33231316 33238082 Pvu9g2321 9 33231316 33238082 ECH