LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g2316	ATGCAACTCCAAATGCTTCTACTCTTCTTTTTCTTAACATCTCCAACGCTTTTCACCACCGCAGCACAGAGCAAGCCGCAGGATCTACTCCGATCATCCTGCGTCCACGCGCGCTACGCGCGTCTCTGCGTCCGCACCCTCTCCCACTACCCGGGGCCCGCCAATACGCCCCTCGACCTGGCCCGGGCCGCGCTCAGGGTTAGCCTGGCCCACACCCGCCGGACCTCCAAGTTCCTGCACGCGCTTTCCAAAGGCGGCGCCGCCGCCATGAGCAAGCGGCAGCGCTCCGCGCTGCACGACTGCACCGAGCAGATCTCGGACTCCGTGGAGCAGCTCCGGCGGAGCCTCGACGAGCTTCAGCACCTACGCTCCGAGACCTTCCGCTGGCAAATGAGCAACGCACAGACGTGGGTCAGCGCCGCCCTCACTGATGGCGACACTTGCCTCGACGGTTTCTCGGGCAATGCCAGGCCCGACGTCAAACGCAGGGTCACCGACGTTGCCAAGGTCACCAGCAATGCTCTGTATATGATTAATCGGCTCGGTCAAAGTAGGACTCGAAAGTCCATGCCCATGCACAGGCCCAGGCCCAGGCCCAGGTCAGGCCTCACCATCTCTAAGAATTGA	627	0.6236	MQLQMLLLFFFLTSPTLFTTAAQSKPQDLLRSSCVHARYARLCVRTLSHYPGPANTPLDLARAALRVSLAHTRRTSKFLHALSKGGAAAMSKRQRSALHDCTEQISDSVEQLRRSLDELQHLRSETFRWQMSNAQTWVSAALTDGDTCLDGFSGNARPDVKRRVTDVAKVTSNALYMINRLGQSRTRKSMPMHRPRPRPRSGLTISKN*	209

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g2316	208	SMART	PMEI_2	25	177	IPR006501	GO:0004857
	Pvu9g2316	208	Coils	Coil	102	122	-	-
	Pvu9g2316	208	PANTHER	PECTINESTERASE INHIBITOR 3	5	186	-	-
	Pvu9g2316	208	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	1	181	IPR006501	GO:0004857
	Pvu9g2316	208	PANTHER	PECTINESTERASE INHIBITOR-LIKE	5	186	-	-
	Pvu9g2316	208	MobiDBLite	consensus disorder prediction	182	208	-	-
	Pvu9g2316	208	CDD	PMEI-like_3	32	181	-	-
	Pvu9g2316	208	Gene3D	Invertase/pectin methylesterase inhibitor family protein	25	182	IPR035513	-
	Pvu9g2316	208	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	27	181	IPR035513	-
	Pvu9g2316	208	Pfam	Plant invertase/pectin methylesterase inhibitor	29	176	IPR006501	GO:0004857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g2316	Pvu-Chr9	33184757	33188080	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu9g2316	29	181	Carbohydrate Esterase	AT3G14310	32.317	1.01e-15	73.2

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g2316	-		-	gmx:100816686	317.39

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