Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2314 ATGGATAGCGGTGTAGGCTGCAAAGTGACAGGGATTAGGCAGATTGTGAGGCTAAAGGAAATGCTGCAGAAGTGGCAGAACGTTACTTTAGGGCCAAAACCTTCCATCCCCACCATTTCTGATCAAGTGCCTAATGATGGAACCTTGAAGCCATTGATCAACAAAAGGGTAGTGAATGTTATGAACTGTGAATCAGACACAGAAGAGAGCTGCCAAAGTCCTGAACCGCTTCCACCACCTGATGTTCCAAAGGGATACTTGGCAGTGTATGTTGGACCTGAGCTCAGGAGGTTCATCATTCCCACCACTTACCTCAGCCACTCTCTCTTCAAGGTTTTGCTGGAAAAGGCTGCTGATGAATTTGGCTTTGATCACAGTGGAGGCCTCACCATCCCTTGTGAGATTGAGACCTTCAAGTACCTTCTCAAGTGCATCGAGAATGAGCAGAAAGACCAACTCAATGATCCCACCCAAAGTGAAAGCTCGGGAAGTGTGGAAGAGTAA 504 0.4722 MDSGVGCKVTGIRQIVRLKEMLQKWQNVTLGPKPSIPTISDQVPNDGTLKPLINKRVVNVMNCESDTEESCQSPEPLPPPDVPKGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKAADEFGFDHSGGLTIPCEIETFKYLLKCIENEQKDQLNDPTQSESSGSVEE* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2314 167 Pfam Auxin responsive protein 77 145 IPR003676 GO:0009733
Pvu9g2314 167 PANTHER SMALL AUXIN-UP RNA-RELATED 7 154 - -
Pvu9g2314 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 154 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2314 Pvu-Chr9 33153762 33158116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2314 1 160 Calmodulin-binding Proteins AT3G43120 64.198 5.93e-72 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2314 K14488 - gmx:100527570 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2314 9 33153762 33158116 Pvu9g2314 9 33153762 33158116 ECH
Pvu3g1326 3 31309789 31311568 Pvu9g2314 9 33153762 33158116 PCT