Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2310 ATGGCATCTTCGGAGAATGAACCTTCTTCTCACTCTTCTCCTCCTCCTCCTCCCACAAATATTTGTATGCAAAAGTTCCGGCTCTATGAGACTCTATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACTTATTGGAGAGTGTTAAAGATTGATCGTCAAGATCCCTCTGAGCTGAGTGTGCTTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTGTTGAGACGTATACATGAGGGGAACAGGTCCACAGGTGGCCTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATAAAATTTTTAGGGCCATACTACATGGTTCTCATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACGGTATATGCTGTCTCAAAGAGTGAGATGATTCCACTGCAAAATCCTTCGGTTGAATCTAACATCGACGAGAATAGATACAAGAAGCTCCTCTTCATGGTTGACCTTACAAAGGATTTCTATTTTAGCTACTCATACTATATCATGCGTAGTCTTCAAAGGAATTTGTGTGATAGTGAGACAGGCCATGTTCTTTATGAGACCATGTTTGTCTGGAATGAGTTTTTGACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTATACGGCTTTTTTAAACAGGAAACACTTGCAATATCCGGGCGTGAGTTCATTCTTACTCTCATTGCAAGACGATCTCGCCATTATGCTGGCACTAGGTATTTGAGACGAGGATTAAATGACAAGGGTAGAGTAGCAAATGATGTGGAGACAGAGCAAATTGTATTTGAAGATGTTCCTGAAGGTCTTCCAGTCCAAATATGCTCTGTTGTACAGAATCGAGGTTCAATCCCTCTGTTCTGGTCGCAGGAAACTTCACGTCTAAATCTTAAGCCTGATATTATATTGTCAAAGAAAGATCAGAATTATCAAGCTACCAGACTTCACTTTGAAAATCTTGTCAAAAGATATGGGAATCCCATAATAATTTTGAATTTGATAAAGTCACATGAGAGGAAGCCTCGCGAGTCCATTCTTCGTTCTGAGTTTGGTAATGCAATTAATTTCATTAACAAAGATTTATCAGAGGAGAACAGGTTAAGGTTTCTTCATTGGGATCTTAAACATTTTCAGAGCAAAGCTACAAATGTTTTGCTACTTCTGGGAAAAGTGGCTGCATATGCTTTGACATTAACAGGTTTTTTATATTGCCAACTGTCACCAACTCCTAGACCTGAGGAATGTAAAGAATGGCCATCTATTAATTTTGCATATGACAATATTGATAAGGGAAGCTTTCAACCCACAAGAGAGGTTGATGTTGGCAATGAAGATGGTAATAATTTAGAGAAGAAACCCAGTGGAGAAGACAACCATGCTAACGGAAATCATTTTGTCAAGCCACCCATGTTCCAAAGGGGGGTTCTTCGAACTAATTGTATAGACTGCTTAGATCGCACAAATGTTGCACAATATGCGTATGGGTTGGCTGCACTTGGCCACCAGCTTCATGCTCTAGGAATTATTGATCACCTGAAAATGGACCTTGATGATCCTGTAAGTGATGATTTGATGGGATTTTATGAACGGATGGGTGACACACTTGCACACCAGTATGGTGGTTCTGCTGCACACAACAAGATTTTCTCTGAGAGGAGGGGACAATGGAAAGCTGCAACACAATCCCAGGAGTTCTTTAGGACTCTTCAACGATATTGCAGCAATGCTTACATGGATGCCGAGAAGCAAAATGCAATTAACATATTCCTGGGGCATTTTCAGCCACAAGTGGGTAAGCCTGCACTGTGGGATTTGGGCTCAGATCAACATTATGATATAGGGAGACATGGGGATGATGATGCAAGGTCATTTGTCAAAAGGTGTTTCTCAGATGGAAGCATTATTCATGGCAAGTCCACACCTACGTCAACCTCAAATCCAAATATTGAAAAATTCTCAAAGCTAGGTTTGCAGAACCAATCAGAAGAAGGAAGCAATTATTTTTGTGACTCGTCGCCTGAAATATCAACATTTGAGAGTGACATGGCATTTTCAAGGTACACTCCCTCAATGCCTCGTAGACAGCTTTTTGGAGACGCTCTAAGAGAGCGCTACCTTGATAGTGAACATTTTTCCTATTCTGCACATGATGTTTCATTCAGCAGTTCCAACTTTGTTGACCTGGATTGGCTGTCTTCTTCTGGAAATTCGTGTGAAGAAGAGCCATTTGAGAGGTTTTCAATTGTCAATTCTTCTATTGCTGGGAATTCTTCAGAAAATGTTGTCAATGGAGTTATTATAGGAGGAGATACTCCCTCCACTAGCGATTTAGACTCGAACACTAAGGGAAGAGAGCGAACTGGGTCAGAGTTATCCTACCGTGATGCCCAGTCCAAAGTTCTAGAGGAATATCCTGATACTTTTGTACAATGGGTGAATAATGGACAGACACTTTGCAATTGA 2502 0.4069 MASSENEPSSHSSPPPPPTNICMQKFRLYETLSNFYMIGRDKSRTYWRVLKIDRQDPSELSVLEDSTTYTESECSDLLRRIHEGNRSTGGLKFVTTCYGIVGFIKFLGPYYMVLITKRRQIGAICGHTVYAVSKSEMIPLQNPSVESNIDENRYKKLLFMVDLTKDFYFSYSYYIMRSLQRNLCDSETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQETLAISGREFILTLIARRSRHYAGTRYLRRGLNDKGRVANDVETEQIVFEDVPEGLPVQICSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKSHERKPRESILRSEFGNAINFINKDLSEENRLRFLHWDLKHFQSKATNVLLLLGKVAAYALTLTGFLYCQLSPTPRPEECKEWPSINFAYDNIDKGSFQPTREVDVGNEDGNNLEKKPSGEDNHANGNHFVKPPMFQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHLKMDLDDPVSDDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWKAATQSQEFFRTLQRYCSNAYMDAEKQNAINIFLGHFQPQVGKPALWDLGSDQHYDIGRHGDDDARSFVKRCFSDGSIIHGKSTPTSTSNPNIEKFSKLGLQNQSEEGSNYFCDSSPEISTFESDMAFSRYTPSMPRRQLFGDALRERYLDSEHFSYSAHDVSFSSSNFVDLDWLSSSGNSCEEEPFERFSIVNSSIAGNSSENVVNGVIIGGDTPSTSDLDSNTKGRERTGSELSYRDAQSKVLEEYPDTFVQWVNNGQTLCN* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2310 833 MobiDBLite consensus disorder prediction 456 471 - -
Pvu9g2310 833 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 2 832 - -
Pvu9g2310 833 ProSiteProfiles Sac phosphatase domain profile. 158 554 IPR002013 GO:0016791
Pvu9g2310 833 MobiDBLite consensus disorder prediction 448 472 - -
Pvu9g2310 833 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 2 832 IPR043573 GO:0043813|GO:0046856
Pvu9g2310 833 MobiDBLite consensus disorder prediction 782 805 - -
Pvu9g2310 833 Pfam SacI homology domain 98 389 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2310 Pvu-Chr9 33091759 33110245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2310 22 833 Acyl Lipid Metabolism Gene Families AT5G20840 60.121 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2310 K22913 - gmx:100786438 1456.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2310 9 33091759 33110245 Pvu9g0860 9 13249918 13268354 ECH
Pvu9g2310 9 33091759 33110245 Pvu9g2310 9 33091759 33110245 ECH
Pvu3g1319 3 30948239 30959535 Pvu9g2310 9 33091759 33110245 PCT