Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2299 ATGGCCTTCCAGGATTTCGAACTCATCACTGAGCGGCGAAGAAACGAGAACAGACTCAAGATGAGGAAGAAGATCCTCATCAGCGTCGTTTCCGCCGTTCTTCTTGCATGCGTGGTTGGCGCCGCCACATTCGTGGTGGTGCAGAGAACCGGTCCCTCAAAAACCCAAACCCCAATGTCAGAAGCCTCGGCGACGCCTCACGTGGACAGAAACTCGAGGCTGGTGGAAATGATCTGCAGCTCAGCGGAGTACAAGGAAAAATGCCAGAAAACCCTCGGCGAGGCTCTGAAGAAGGACCCGAAGCTGGCGGAGCCCAAGGACCTGATCATGATATCCATGATCGTGGCCGAGAACGAGGTGAACAAAGCCTTCAACGCCACATCGAAACTGAACTTCGCGTCGGCAGACGAGAAAGGCGCGTACAGCGATTGCAGGGAGATGTTCGAGGACGCCAATGATGAGCTGAAACGTTCGATCGAGGAGGTCGGTGAAAGCGATCCCAAAACACTCTCCGCCAAAGCTGCTGAACTCAACAACTGGCTCAGCGCGGTTATGAATTACCAGCAAACATGCATCGACGGGTTTCCCGAAGGAAAAATGAAGGACGAACTCACCACAATGTTCACCGAGTCAAGGGAGCTTGTGAGCAATTGTCTTGCCGTTGTCTCGCAGTTTTCTTCCTTCTTTTCGATCTTCCAAGGAGCTGGGGACATTCACCTTCCATGGGAAATCGACAATGGTGATGCACCTGCCCCTGCTTCTCCTTCTACTCCTGCTACTTCTCCTTCTGCTTCCGCTTCTGCTTCTGCTCCTGTTGCGGCTGTAGGTTCTGCTCTTGCTCCTGGTTCCGCTCCTCGTGCAGCTCCGGTCCTTCCTCCTTTGGATGGTCCACTTCCAGCATGGGCTACCCCGGTTCCTGCTTGGGCTGGCCCTTCTGACTTCGTAGGATCAGATGAGAAACCCACACCCAATGTTACCGTCGCACAAGATGGTAGCGGAGACTTCAAAACCATCTCTGAAGCCTTGGCTGCAATCCAAGCACCGTACGAGGGAAGGTACGTGGTTTATGTTAAAGCCGGAGTTTACGATGAGACCGTGACAGTGACAAAGAAATTGGCAAACCTAACCATGTACGGTGACGGAGGTGACAAAAGTATCATCACTGGCAACAAAAACTTCGTGGATGGAGTCAGAACTTTCCAAACTGCATCATTTGTGGTACTTGGAGATGGATTCTTGGGCAGAGAAATGCAATATAGAAACACTGCTGGAGCAGAGAAGCATCAAGCAGTGGCTGCAAGAGTGCAAGCCGATCAAGCAATCTTTTTGAACTGTGTGTTTGACGGTTACCAAGACACTCTCTACGCCCAAACCCACAGACAGTTCTACCGCGACTGCACAATCACCGGCACCATCGACTTCATCTTCGGGGACGCATCAGCAGTGTTTCAAAACTGCACCATTTTGGTGAAAAAGCCCCTTGACAACCAGCAGAACATTGTGACTGCACAAGGGAGACTCGACAAGCAAGAGGACACTGGGTTCGTTCTGCAGAAGTGTGTGATCAAAGCTGCTGATGACTTGGTCCCAGTGAAGGCCGGTGTGAGGAACTACCTCGGAAGGCCATGGAAGGAGTACTCAAGAACCATCATCATGGAGACTGAAATCCAGGACTTGATTCACCCCGATGGGTGGCTTCCTTGGGAAGGTGACTTTGCACTGAACACACTGTACTATGGTGAGTTCAACAACAATGGAGCAGGTTCCAACACCAATGCTAGGGTGAATTGGCCTAACCGCAAAGTGATTGACACGGATGAGGCTACTAGGTACACTGTAGAGGCTTTCTTGCAAGGGGCATGGATCAATGGTACTGGTGTACCTGCTCATTTGGGCTTGTACGCTTAA 1908 0.5142 MAFQDFELITERRRNENRLKMRKKILISVVSAVLLACVVGAATFVVVQRTGPSKTQTPMSEASATPHVDRNSRLVEMICSSAEYKEKCQKTLGEALKKDPKLAEPKDLIMISMIVAENEVNKAFNATSKLNFASADEKGAYSDCREMFEDANDELKRSIEEVGESDPKTLSAKAAELNNWLSAVMNYQQTCIDGFPEGKMKDELTTMFTESRELVSNCLAVVSQFSSFFSIFQGAGDIHLPWEIDNGDAPAPASPSTPATSPSASASASAPVAAVGSALAPGSAPRAAPVLPPLDGPLPAWATPVPAWAGPSDFVGSDEKPTPNVTVAQDGSGDFKTISEALAAIQAPYEGRYVVYVKAGVYDETVTVTKKLANLTMYGDGGDKSIITGNKNFVDGVRTFQTASFVVLGDGFLGREMQYRNTAGAEKHQAVAARVQADQAIFLNCVFDGYQDTLYAQTHRQFYRDCTITGTIDFIFGDASAVFQNCTILVKKPLDNQQNIVTAQGRLDKQEDTGFVLQKCVIKAADDLVPVKAGVRNYLGRPWKEYSRTIIMETEIQDLIHPDGWLPWEGDFALNTLYYGEFNNNGAGSNTNARVNWPNRKVIDTDEATRYTVEAFLQGAWINGTGVPAHLGLYA* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2299 635 TIGRFAM PME_inhib: pectinesterase inhibitor domain 62 224 IPR006501 GO:0004857
Pvu9g2299 635 PANTHER PECTINESTERASE 15 633 - -
Pvu9g2299 635 MobiDBLite consensus disorder prediction 246 265 - -
Pvu9g2299 635 Pfam Plant invertase/pectin methylesterase inhibitor 74 220 IPR006501 GO:0004857
Pvu9g2299 635 Pfam Pectinesterase 324 619 IPR000070 GO:0030599|GO:0042545
Pvu9g2299 635 ProSitePatterns Pectinesterase signature 2. 468 477 IPR033131 -
Pvu9g2299 635 SUPERFAMILY Pectin lyase-like 322 628 IPR011050 -
Pvu9g2299 635 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 226 IPR035513 -
Pvu9g2299 635 SMART PMEI_2 70 221 IPR006501 GO:0004857
Pvu9g2299 635 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 15 633 - -
Pvu9g2299 635 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 225 IPR035513 -
Pvu9g2299 635 CDD PMEI-like_3 78 222 - -
Pvu9g2299 635 Gene3D - 319 633 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2299 Pvu-Chr9 32975759 32978032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2299 1 634 Carbohydrate Esterase AT2G26450 38.427 1.30e-149 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2299 - - gmx:100796485 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1314 3 30869684 30872074 Pvu9g2299 9 32975759 32978032 PCT