Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2298 ATGGCTGATTCATCTCATAAACTCTTCTTCCTTCTGTCTGCAATCTTCTTCTCACATACTTGTGTCCAATCATCCAATGCTTCCGTAACAAATCAAGTTGATGTCTCTTTCATAAGATCTTTGTGCACAACGACCCCATTCCCAGACGATTGTTTAAGGTCATTGAATGTATCCATCTCAATAGGAACATCTCCAAATCCAAAGATAAACAACTGCCTCATTCACTCCCTCCAAACAGCAAGATCTGAAACCATAAAGCTCATAAATCTCTTCAACAATGTTGGACACCCAAGCATCATAGAGAAGCAAAGAGGAGCAGTTCGAGACTGCCAAGAACTCCATCAATCCTCATTGGCTTCTTTGGAAGGATCCATATCAGGGATCCGTTCCTACAACCTGGACATAACTGATGTAGCAATCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAGGCCTAGATTCTGCTACTGGCACCATGAAGCCAGTTCTGGTGAAATCTGTGGTCAACACTTACAAGCATGTCAGTAACTCTCTCGCAATTCTCTCTAACCCAGAGATGGGGACTCCTGAAAACAACCCTTTGAAGGGTGACCCAAAGTGGCTACCAAGCAGTGACCAAAGTTTCTTTCATTACTTATATGGGCTAGAATATGACCCAGATGAAGTGCTAGTAGTGGCTTCAGATGGAACAGGGTATTTTAGCAGCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCATGGGTAGGATAGTGATCTATGTGAAAGAAGGGACTTATGAGGAAAACGTGGAAATCCCAAGCTATAAGACCAACATTGTGATGATTGGCGATGGAAGCGATGTCACTGTCATAACTGGTAACAGAAGCGTAGGTGATGGCTACACCACTTTCGGATCTGCAACTCTTGCGGTCTCTGGTAAAGGTTTTCTTGCACGTGATATTGCAATTGAGAACAGTGCAGGGCCAGAGAAGTACCAAGCAGTGGCTTTGAGGGTAAGTGCAGACTTAACTGCTTTTTACAGGTGTGCAATTTATGGTTACCAAGACACTTTATATGTTCACTCCTCTAGACAATTCTATAGAGAGTGTGACATTCATGGGACCATAGATTTCATATTTGGAAATGCAGTAGTTGTTCTACAAGAATGTAACATTATATCCAGAAAACCATTGCATGGCCAAGCCACTGTGATCACTGCACAGTCCAGAGATGACCCACTTGAGCCAACTGGCATCGTAATCCAACGATGCAACATCAAAGCTTCCTTCGATAACTGCAGTGTTAAGAGCTACCTTGGGAGGCCATGGAAGCCCTTTTCTCGCACAGTTTACCTTGACTCCTTCATTGATGACTTCATTGACCCAAAGGGTTGGACAGAGTGGAATAATGATAAGAAAGGATTGGACACCTTGTATTACGGAGAGTACGAGAATTATGGACCTGGTTCCAGCACAGACAATCGTGTAAAATGGTCTGGGTACCATGTAATGGACGATGATGATGCCTACAATTTCACACTTTCAAACTTCATTCATGATGTTTACTGGCTTGTGTCTACTTATTTTCCTTTTGATTTATGGATCTGA 1602 0.4288 MADSSHKLFFLLSAIFFSHTCVQSSNASVTNQVDVSFIRSLCTTTPFPDDCLRSLNVSISIGTSPNPKINNCLIHSLQTARSETIKLINLFNNVGHPSIIEKQRGAVRDCQELHQSSLASLEGSISGIRSYNLDITDVAIYLSAALTNKNTCLEGLDSATGTMKPVLVKSVVNTYKHVSNSLAILSNPEMGTPENNPLKGDPKWLPSSDQSFFHYLYGLEYDPDEVLVVASDGTGYFSSITEAINFAPNNSMGRIVIYVKEGTYEENVEIPSYKTNIVMIGDGSDVTVITGNRSVGDGYTTFGSATLAVSGKGFLARDIAIENSAGPEKYQAVALRVSADLTAFYRCAIYGYQDTLYVHSSRQFYRECDIHGTIDFIFGNAVVVLQECNIISRKPLHGQATVITAQSRDDPLEPTGIVIQRCNIKASFDNCSVKSYLGRPWKPFSRTVYLDSFIDDFIDPKGWTEWNNDKKGLDTLYYGEYENYGPGSSTDNRVKWSGYHVMDDDDAYNFTLSNFIHDVYWLVSTYFPFDLWI* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2298 533 PANTHER PECTINESTERASE 7 530 - -
Pvu9g2298 533 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 186 IPR006501 GO:0004857
Pvu9g2298 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 186 IPR035513 -
Pvu9g2298 533 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Pvu9g2298 533 SMART PMEI_2 33 184 IPR006501 GO:0004857
Pvu9g2298 533 CDD PMEI-like_3 40 188 - -
Pvu9g2298 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 187 IPR035513 -
Pvu9g2298 533 Gene3D - 222 531 IPR012334 -
Pvu9g2298 533 Pfam Plant invertase/pectin methylesterase inhibitor 36 184 IPR006501 GO:0004857
Pvu9g2298 533 PANTHER PECTINESTERASE 7 530 - -
Pvu9g2298 533 Pfam Pectinesterase 227 517 IPR000070 GO:0030599|GO:0042545
Pvu9g2298 533 SUPERFAMILY Pectin lyase-like 224 530 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2298 Pvu-Chr9 32966761 32968442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2298 40 530 Carbohydrate Esterase AT2G26440 58.743 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2298 - - gmx:100776969 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1313 3 30860912 30863025 Pvu9g2298 9 32966761 32968442 PCT