Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2297 ATGAACATAGTTGATGCAAGAGCCTACCTCAGTGCAGCTCTCACCAACAAGAACACATGCCTGGAAGGCCTAGATTCTGCTTCTGGCACCATGAAGCCAGCTCTGGTGAAATCTGTGATCAACACTTACAAGCATGTCAGTAACTCTCTTTCTGTGCTACCGAAGCCTGGGACGGGAACTCCCAAGGGTCAAAAGAATAACCAGCCTTTGATGAATGCTCCAAAGTTATCAACCCGAAAGCAAGGTCTCTTTCAAGACTCAGATAGGGGAGAATATGACCCAAATGAAGTTCTAGTTGTGGCAGCAGATGGAACTGGGAACTTTAGCTCCATCACTGAAGCAATCAACTTTGCTCCAAATAACAGCATGGGTAGGATAGTGATCTATGTGAAAGAAGGGATTTATGAGGAAAACGTGGAAATTCCAAGCTATAAGACCAACATTGTGATGCTTGGCGATGGAAGCGATGTCACTGTCATAACTGGTAACAGAAGCGTTGGTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCGGTATCTGGTGATGGTTTTCTTGCACGTGATATTGCAATTGAGAACAGTGCAGGGCCAGAAAAGCACCAAGCAGTGGCTTTGAGGGTAAATGCAGACTTAACTGCTTTTTACAGGTGTGCAATTTATGGTTACCAAGACACTTTATATGTTCACTCCTTTAGACAATTCTACAGAGAGTGTGACATTTTTGGGACCATAGATTTCATATTTGGAAATGCAGCAGCGATTCTACAAGATTGCAACATTATATCCAGAAAGCCTTTGCCTGGCCAATTCACTGTTATCACTGCACAATCCAGAGATAGCCCTGATGAGGACACTGGCATCTCAATCCAAAACTGCTCCATCATAGCTACCCTTGATCTGTATTCCAACTCCAGTAGTTTCAAGAGCTACCTTGGGAGGCCATGGAGGGTCTATTCTCGCACTGTTTACCTCGAGTCTTACATTGATAACTTCATTGATCCAAAGGGTTGGACAAAGTGGTCTACTGAACAACCATTAGACACATTGTATTATGGAGAATATGACAACTATGGACCTGGTTCCAGCATAGATAATCGTGTACAATGGTTGGGCTACCATTTGATGGATTATGGTGATGCATATCGTTTCACAGTTTCGGAGTTCATCAATGGAGATGGTTGGCTTGATACTACTTCGGTACCTTATGATAATGGGATTTGA 1224 0.4346 MNIVDARAYLSAALTNKNTCLEGLDSASGTMKPALVKSVINTYKHVSNSLSVLPKPGTGTPKGQKNNQPLMNAPKLSTRKQGLFQDSDRGEYDPNEVLVVAADGTGNFSSITEAINFAPNNSMGRIVIYVKEGIYEENVEIPSYKTNIVMLGDGSDVTVITGNRSVGDGWTTFRSATLAVSGDGFLARDIAIENSAGPEKHQAVALRVNADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIFGTIDFIFGNAAAILQDCNIISRKPLPGQFTVITAQSRDSPDEDTGISIQNCSIIATLDLYSNSSSFKSYLGRPWRVYSRTVYLESYIDNFIDPKGWTKWSTEQPLDTLYYGEYDNYGPGSSIDNRVQWLGYHLMDYGDAYRFTVSEFINGDGWLDTTSVPYDNGI* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2297 407 PANTHER PECTINESTERASE 3 406 - -
Pvu9g2297 407 CDD PMEI-like_3 2 58 - -
Pvu9g2297 407 Gene3D - 93 407 IPR012334 -
Pvu9g2297 407 Pfam Pectinesterase 98 393 IPR000070 GO:0030599|GO:0042545
Pvu9g2297 407 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 55 IPR035513 -
Pvu9g2297 407 SUPERFAMILY Pectin lyase-like 95 405 IPR011050 -
Pvu9g2297 407 PANTHER PECTINESTERASE 3 406 - -
Pvu9g2297 407 ProSitePatterns Pectinesterase signature 2. 241 250 IPR033131 -
Pvu9g2297 407 MobiDBLite consensus disorder prediction 51 79 - -
Pvu9g2297 407 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 53 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2297 Pvu-Chr9 32960745 32962566 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2297 3 407 Carbohydrate Esterase AT2G26440 69.417 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2297 - - pvu:PHAVU_009G2224000 832.402