Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2296 ATGGCTTGTTCATCTCATAAACTTCTCTTTCTTCTCTTTGCAATCTTCTACTCTCACACTTCTGCTGTCAACTCCAACAATGCTTCCACAACACTTCATTCTAATCTCTCTTCCTTGAGATCTTTCTGCACAGCCACCCCATATCCACAAGTTTGTTTCGATTCATTGAAGCTATCCATCTCAATAAACATCAGTCCAAATATTATCAGCTACCTCCTTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTCTCCAATATCTTCCACAATGTTGGACACTCAACCATCATAGAGAAGCAAAGAGGAGCA 315 0.4063 MACSSHKLLFLLFAIFYSHTSAVNSNNASTTLHSNLSSLRSFCTATPYPQVCFDSLKLSISINISPNIISYLLQSLQVAISETTKLSNIFHNVGHSTIIEKQRGA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2296 105 PANTHER PECTINESTERASE 7 104 - -
Pvu9g2296 105 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 97 IPR035513 -
Pvu9g2296 105 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 105 IPR035513 -
Pvu9g2296 105 PANTHER PECTINESTERASE 7 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2296 Pvu-Chr9 32960274 32960588 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2296 20 105 Carbohydrate Esterase AT2G26440 51.724 1.73e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2296 - - pvu:PHAVU_009G2224001 193.356