Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2295 ATGCAATTCATTTCAATGGCTGTTTTCTGGACAAAACAGCCAGCTCCTATTCCATCTGCTACATTCATCTTCATCTTCTTCTTCTTTGCTCCCTGTGATTTGGCGATACTCCATAACCTGAAAGTTTCTCCTTCCGAATTCTTAGGCTCCGTGAGAAAAGTAGGTGATGTTTTGCAAAACGTTACCTCCACTCTCAAATCCGAGTTCAACAATGTGAAGAGTGTGTTTCCTCTTTCTGATGCCATTTTCGCATGTCTGGAGTTGTTGGACTTGTCAGCTGATGAACTCAGCTGGTCTATTTCCGCAGTTGAAAGTCCCCAAGGGAAGCATAACAGTACTGGGAATCTGAGCTCTGATTTGAGCACATGGCTAAGTGCTGTACTTGCGAACACAGACACGTGCATGGAAGGTTTTGATGGTACAAGTGAAAGTGTGAAGGATTTGATATCCAATGAAATTAAGGAAGTGACGTGGTATCTCCAAAAGCTGGTGAACCAGATTGTTTGGGATTATTTCAGAAGGGACAAAGTTCCTTCATGGGTTGAACCACTGCTGCAGAGAAAAACGATGCCTGCGGATGCTGTAGTTGCTGCTGATGGGAGTGGTGATTTTACTAGGGTGATGGATGCTGTGAATGCAGCTCCTGAGTATAGCATGAGACACTTTGTGATACACATAAAGAAGGGTTTGTACACTGAGAAAGTTGAGATTAAAAAGAACAAGTGGAACCTTGTGATGATTGGAGAGGGTATGGATGCTACTGTTATCTCCGGTAACCTCAGCCGTACTGAAAATTTAACCACATTCAGAACAGCTACCTTTGCTGTGAATGGGAGAGGATTCATAGCAACAGCCATTTCCTTCAAGAACACTGCAGGACCCGAAAGAAACCAAGCTGTTGCACTGAGATCAGATTCTGATCTCTCTGTGTTCCACCGATGTGGGATTTTTGGCTACCAAGACACCCTCTATGCTCACTCCTTGCGCCAATTTTACAGAGAATGCAAAATAAGTGGCACTGTGGATTTCATATTTGGACATGCCAGTGCAGTGTTCCAGAACTGCACAATACTGGTAAAAAAGGGCTTACAAGGACAGAAGAACACAATCACAGCTCAAGGAGAAACGTGCCCTTCTCAGTCATCTGGCTTCTCCATCCAATTCTCCAACATTTCAGCAGACTATGACCTTCTGCCCTCAGTTAACAGCACCTCAACGTACCTTGGGAGGCCGTGGAAGAAATATTCTAGAGCAGTTTTCATGCAGTCTTACATGAGTGAGGTGTTAAGGCCAGAAGGGTGGCTCGAGTGGAATGGATCATTGTATTTGGACACTTTGTACTTTGGAGAGTACAAGAATTATGGACCAGGAGCTAGGGTTGATAAGAGAGTGAAGTGGCCAGGGTACCATGTCATAAATGATTCTAGCCAGGTTTATAACTTCACTGTTGCCAATCTCCTTTTGGGGGATCTTTGGATACCTTCAACTGGTGTAACATACACTCCTGGATTTGGAGTCTGA 1521 0.4418 MQFISMAVFWTKQPAPIPSATFIFIFFFFAPCDLAILHNLKVSPSEFLGSVRKVGDVLQNVTSTLKSEFNNVKSVFPLSDAIFACLELLDLSADELSWSISAVESPQGKHNSTGNLSSDLSTWLSAVLANTDTCMEGFDGTSESVKDLISNEIKEVTWYLQKLVNQIVWDYFRRDKVPSWVEPLLQRKTMPADAVVAADGSGDFTRVMDAVNAAPEYSMRHFVIHIKKGLYTEKVEIKKNKWNLVMIGEGMDATVISGNLSRTENLTTFRTATFAVNGRGFIATAISFKNTAGPERNQAVALRSDSDLSVFHRCGIFGYQDTLYAHSLRQFYRECKISGTVDFIFGHASAVFQNCTILVKKGLQGQKNTITAQGETCPSQSSGFSIQFSNISADYDLLPSVNSTSTYLGRPWKKYSRAVFMQSYMSEVLRPEGWLEWNGSLYLDTLYFGEYKNYGPGARVDKRVKWPGYHVINDSSQVYNFTVANLLLGDLWIPSTGVTYTPGFGV* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2295 506 Pfam Plant invertase/pectin methylesterase inhibitor 66 164 IPR006501 GO:0004857
Pvu9g2295 506 ProSitePatterns Pectinesterase signature 2. 337 346 IPR033131 -
Pvu9g2295 506 SUPERFAMILY Pectin lyase-like 190 503 IPR011050 -
Pvu9g2295 506 SMART PMEI_2 18 160 IPR006501 GO:0004857
Pvu9g2295 506 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 167 IPR035513 -
Pvu9g2295 506 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 156 IPR035513 -
Pvu9g2295 506 CDD PMEI-like_4 39 169 - -
Pvu9g2295 506 Pfam Pectinesterase 193 489 IPR000070 GO:0030599|GO:0042545
Pvu9g2295 506 PANTHER PECTINESTERASE 42 164 - -
Pvu9g2295 506 PANTHER PECTINESTERASE 173 504 - -
Pvu9g2295 506 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 42 164 - -
Pvu9g2295 506 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 173 504 - -
Pvu9g2295 506 Gene3D - 191 505 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2295 Pvu-Chr9 32938722 32940635 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2295 29 504 Carbohydrate Esterase AT3G43270 54.016 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2295 K01051 - gmx:100798620 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1312 3 30851467 30855033 Pvu9g2295 9 32938722 32940635 PCT