Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2293 ATGGCGCTTTCTTCAACCAAATACTTATCTCCAACAGTGGCCACACAAACACTCATCTTCTTCTTCCTTTTGTTTTTTCCTACTGTGTTCACTGCCTCGCATGGCGGCAGCAGCAGCAGCATCAACCCCGTGGGATTCGAGTCTCTGAAGGTTTCGCCTTCTGAATTCGCGGGGACAGTGAAAACTGTGGTTGATGTGTTGCAAGATGTGACCTCTATCCTCTCTGAGTTTGGTTCCGGCTTCGGAGACTCGCTTCTTTCTAACGCCGTCTCTGATTGTCTAGATTTGCTTGACCTCTCCTCTGATGAACTTGATTGGTCTGTCTCTGCTACCCAGACGCCCCAAGGGAAGCATAACAGCACAGGAAACCTAAGTTCAGATTTGAGGACATGGGTAAGTGCTGCACTTGCGAACCAAGACACATGCATGGACGGATTCGACGGCACCAACGGCATTGTTAAGGGTTTAGTGTCCTCAGGGCTAGGCCAAGTGATGTCATTGCTGCAACAACTTCTTACACAGGTGAACCCCGTTTCGAACCACTTCCCTTTCCCTTCCACACAAGGGCAGTTTCCGTCGTGGGTTAAACCAGAGGACAGCAAGCTGCTCCAGGCAAATGGGGTGGTCGTGGATGCGGTGGTTTCCACCGATGGTACCGGGAACTTCACCAAGCTCATGGATGCAGTCATGGCTGCGCCTAATTACAGCATGAAACGCTACGTGATATTCGTGAAGAGAGGGGTTTACCATGAGAACGTTGAGATCAAGAAGAAGAAGTGGAACCTCATGATGATCGGAGAAGGCATAAGTGCCACTGTTATCACCGGTAACAGGAGCTTCATCGACGGTTGGACCACGTTCCGGTCAGCAACTTTTGCTGTGAGTGGCAGAGGATTCATAGCACGAGACATTACCTTCCAGAACACAGCAGGACCAGAAAAGCACCAAGCGGTGGCACTGAGATCAGACTCTGACCTCTCTGTATTCTACCGATGTGGGATTTTTGGTTACCAAGACAGCCTTTATACTCACACCATGCGCCAATTCTACAGAGAATGCAGAATCAGTGGCACTGTGGATTTCATATTTGGTGATGCCACTGCCATTTTCCAAAACTGCCACATAGAGGTCAAAAAAGGGTTGCCAAATCAAAAGAACACCATCACAGCTCAAGGAAGGAAAACCCCTGATGAACCAACTGGTTTCTCAATCCAGTTTTGCAACATTTCTGCTGATTCTGACCTTGTGAACTCGGTTAACTCCACCCACACATACCTTGGCAGACCCTGGAAACCATATTCCAGAACAGTTTTCATGCAGTCTTACATCAGTGATGTGTTGAGCCCAGAAGGGTGGTTGGAGTGGAATGGGGACTTTGCCTTGGACACATTATACTATGCAGAGTACTTGAATTATGGGCCTGGTGCTGGTGTTGCTAACCGAGTGAAATGGCCAGGGTACCATGTGATGAATAATTCTAGCCAGGCTAGTAATTTCACAGTATCACAATTTATTGAGGGGAATCTTTGGCTACCTTCAACTGGTGTAACCTTCACATCTGGATTGGAAGAATGA 1575 0.4806 MALSSTKYLSPTVATQTLIFFFLLFFPTVFTASHGGSSSSINPVGFESLKVSPSEFAGTVKTVVDVLQDVTSILSEFGSGFGDSLLSNAVSDCLDLLDLSSDELDWSVSATQTPQGKHNSTGNLSSDLRTWVSAALANQDTCMDGFDGTNGIVKGLVSSGLGQVMSLLQQLLTQVNPVSNHFPFPSTQGQFPSWVKPEDSKLLQANGVVVDAVVSTDGTGNFTKLMDAVMAAPNYSMKRYVIFVKRGVYHENVEIKKKKWNLMMIGEGISATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECRISGTVDFIFGDATAIFQNCHIEVKKGLPNQKNTITAQGRKTPDEPTGFSIQFCNISADSDLVNSVNSTHTYLGRPWKPYSRTVFMQSYISDVLSPEGWLEWNGDFALDTLYYAEYLNYGPGAGVANRVKWPGYHVMNNSSQASNFTVSQFIEGNLWLPSTGVTFTSGLEE* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2293 524 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 50 522 - -
Pvu9g2293 524 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 169 IPR035513 -
Pvu9g2293 524 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Pvu9g2293 524 PANTHER PECTINESTERASE 50 522 - -
Pvu9g2293 524 SMART PMEI_2 36 174 IPR006501 GO:0004857
Pvu9g2293 524 Pfam Pectinesterase 211 508 IPR000070 GO:0030599|GO:0042545
Pvu9g2293 524 SUPERFAMILY Pectin lyase-like 211 521 IPR011050 -
Pvu9g2293 524 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 179 IPR035513 -
Pvu9g2293 524 Pfam Plant invertase/pectin methylesterase inhibitor 83 159 IPR006501 GO:0004857
Pvu9g2293 524 Gene3D - 209 524 IPR012334 -
Pvu9g2293 524 CDD PMEI-like_4 30 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2293 Pvu-Chr9 32905889 32910081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2293 20 522 Carbohydrate Esterase AT3G43270 64.854 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2293 K01051 - gmx:100801813 874.774