Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2290 ATGGGTGGCTCTGTCACTGTCAAGTCCGAGGTTTCCCTTCTAGAATCTTCTCCCTCTCCTGTGGAGAAGCCTGATGGAGTTTGTTCCAACATGGAGGAACACCACCTGGTCCAACCCAATATGAATGACTCCTCACCCAACAAGTCAGTGCCTGCATCTGGACTTAATGCAGTGATTCCTAGTACAAACCAGCTTACCATATTCTACAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCTGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAATCTACTGAAATGAAGAAGATTGGGACCCAATCTACCCTCATTTCACCTGTTCCCACAAGGCCTTCTTCTCCACATGGAATCACTAACAATATTGCTGCCTCACAGAAGAATTCCATTTGCAGGCTGCAAGAATTTCCAATAGCACGCAGGCATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGATAGGTTGGGTAGCAAAGCTCCTTATCCTTCCTCATCAACCACTAAAGTGGGTGATAACATAGAGAACAACTTCTGTGCTGACAATGCTCCAGAACTGATTTCCTTGAATCGAGCAGAGGAGGAATTTCATCCAACTGTCTCTGCCTCTTGA 624 0.4567 MGGSVTVKSEVSLLESSPSPVEKPDGVCSNMEEHHLVQPNMNDSSPNKSVPASGLNAVIPSTNQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAKSTEMKKIGTQSTLISPVPTRPSSPHGITNNIAASQKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSSTTKVGDNIENNFCADNAPELISLNRAEEEFHPTVSAS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2290 207 MobiDBLite consensus disorder prediction 1 25 - -
Pvu9g2290 207 ProSiteProfiles Tify domain profile. 58 93 IPR010399 -
Pvu9g2290 207 SMART tify_2 58 93 IPR010399 -
Pvu9g2290 207 MobiDBLite consensus disorder prediction 1 16 - -
Pvu9g2290 207 Pfam tify domain 60 92 IPR010399 -
Pvu9g2290 207 Pfam Jas motif 142 166 IPR018467 -
Pvu9g2290 207 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 45 184 IPR040390 -
Pvu9g2290 207 PANTHER DIVERGENT CCT MOTIF PROTEIN 45 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2290 Pvu-Chr9 32854728 32858650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2290 63 173 Tify Gene Family AT5G20900 51.261 3.08e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pvu9g2290 tify 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2290 K13464 - gmx:100306045 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1304 3 30689612 30692651 Pvu9g2290 9 32854728 32858650 PCT