Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2279 ATGGAAGAAAAATCTTCGTTAAAAAGTTTGCTGAAAGATGAAGAAAGGCCTTATGATTGTAATACAACAAGGAACCGAACCGATGAACCCTCTATGGGATCTACTCTTCTCTGCTTGAGCCTGAATAACTCTGGACAGCCCTTTAACCAAATGGGCATCCTGAGAATGAAGCTTGAGGAAGCGAAGAAAGAGAATGAAATCTTAAAGGCCATGCTCACTCAGGTCAATGAACACTGCACTGTTCTTCAGAATCGCATACTTTTTGAGATGCAGCAGCATCAACTCTCTTCATCACCTTGCAATAATAACAATAATCATGACTCGCAGGGAGAAATGCAAGATGTGGAGAAACCAATGCTACATACTCGGCAGTTTTTGAACATTGGTGACTGTTCTTCATCACTTTCAGAGGGTTACAAAGAAAACTTTGTAAAGAAAATGTTAGGCAGAAGCCTGGCATGTGAGAAAAACAATGTTGTTGAAGGTGAAATGAAGAAAAAAATAGCATTGGATGAAGCAAAATGCAGAGAAGATCAAGCATCTGAGGTTACTTGCAGAAGAGCTAAAGTATCCATCAGAGCACGATCAGATTTTTCTATGATGGGAGATGGTTGTCAATGGAGAAAGTATGGACAAAAGACTGCAAAAGGAAACCCTTGTCCCCGAGCCTACTACCGTTGCAGCATGGGAACTGCATGTCCAGTTCGTAAACAGGTGCAGAGGTGTTTTAAGGATGAGACTGTTCTCATCACAACCTACGAAGGGAGCCATAACCATCCACTCCCACCAGCAGCCAGAGGTTTGGCAAGCTCAACATCAGCAGCACTCAACATGTTCCTTTGTGGCTCAATCTCAAGTTCAGTTGCCACCACAACTCCTCCAAACTCACCTCTCTTCTCTTCATCACTGTCTTCTATTTCCCCAACTGCACTAGCTACTTTCTCCCACAATGCAACTTGTCCCACAGTAACACTGGACTTGACCCACCCCAACAGCAATAACTATCTCCACTTCCAAACACACCCTTTGTTCCCTCTCCCACTACATGCCCACTCTCCAACCTTGTTAACCCCAGACAAAAACCTTACATTGGTGGATGTTGTCAGTGAGGCTATAACCAAAGACCCTTCTCTCAAGGCAGCACTTTTTTCAGCCATTTCCTCACTCAGTAAGAGTAACAGTGGTTATGATCCTTGTTCTAAGATGCCTGCAATACCACCTCATCAGCCTTACACTACTGAGTTGACATAG 1251 0.4357 MEEKSSLKSLLKDEERPYDCNTTRNRTDEPSMGSTLLCLSLNNSGQPFNQMGILRMKLEEAKKENEILKAMLTQVNEHCTVLQNRILFEMQQHQLSSSPCNNNNNHDSQGEMQDVEKPMLHTRQFLNIGDCSSSLSEGYKENFVKKMLGRSLACEKNNVVEGEMKKKIALDEAKCREDQASEVTCRRAKVSIRARSDFSMMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGSHNHPLPPAARGLASSTSAALNMFLCGSISSSVATTTPPNSPLFSSSLSSISPTALATFSHNATCPTVTLDLTHPNSNNYLHFQTHPLFPLPLHAHSPTLLTPDKNLTLVDVVSEAITKDPSLKAALFSAISSLSKSNSGYDPCSKMPAIPPHQPYTTELT* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2279 416 MobiDBLite consensus disorder prediction 393 416 - -
Pvu9g2279 416 Gene3D WRKY domain 185 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g2279 416 MobiDBLite consensus disorder prediction 1 31 - -
Pvu9g2279 416 Pfam WRKY DNA -binding domain 203 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2279 416 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 2 393 - -
Pvu9g2279 416 SUPERFAMILY WRKY DNA-binding domain 194 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g2279 416 SMART WRKY_cls 201 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2279 416 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 393 IPR044810 GO:0003700
Pvu9g2279 416 Coils Coil 51 78 - -
Pvu9g2279 416 MobiDBLite consensus disorder prediction 1 23 - -
Pvu9g2279 416 ProSiteProfiles WRKY domain profile. 196 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2279 Pvu-Chr9 32729678 32733766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2279 54 328 WRKY Transcription Factor Family AT4G04450 40.705 1.43e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g2279 WRKY 1.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2279 - - gmx:100781603 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2279 9 32729678 32733766 Pvu3g1287 3 30385985 30389924 PCT