Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2273 ATGGTGATTGTAAACCTTGGGAGAAAGGAGGGGCATGGAAAACGACTTGGGAAATACGAGTTGGGAAAGACTCTTGGAGAAGGAAATTTTGGGAAGGTCAAGTTGGCAAGGGACACTGATTCTGGGAAGCTTTTTGCTGTTAAGATCCTTGAGAAGAGCAGGATTATTGACCTCAATAACACTGATCAGATAAAGAGGGAAATATCTACCTTGAAGCTTCTGAAGCACCCTAATGTCGTCAGATTGTACGAGGTCTTGGCTAGCAAAGCCAAAATTTACATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGACAAAATTGCATCCAAAGGTAAACTTGGAGAAGCTGAAGGTAGGAAGATATTCCAACAGTTGACTGATGGTGTGAGCTTCTGCCACAGTAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTTCTCGATGCCAAAGGGAACATAAAGATAACCGATTTTAACCTTAGTGCTTTGCCTCAGCATTTTAGGGAAGATGGGTTGCTTCATACTACTTGTGGAAGTCCCAACTATGTTGCTCCTGAGATTCTTGCTAATAAAGGCTATGATGGTGGAACATCAGATATATGGTCATGTGGTGTTATCTTGTATGTAATTCTTACAGGATATCTTCCTTTCGATGACAGAAATCTTGCAGTTCTTTATCAAAAGATTTTTAAAGGAGACGTTCAGATACCAAGATGGCTATCACCTGGTGCTCAAAACATTATAAAAAGAATGCTTGATCCAAATCCTAAAAGCCGGATAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAAGGTTATACTCCTGCAAATCCAGATAATGAAGAAGAGGGTGTGTACATTGATGATGATGAAGCCTTTTCCATCCATAATGCGTCACTTGAATCAGATCAGGGTAGTCCAACATCGCCACCACTTGTCAATGCATTTCAATTGATAGGGATGTCTTCAAGTCTAGATCTCTCTGGCCTATTTGAGAAAGAGGATGTTTCGGAGAGGAAGTTAAGGTTTACATCCACTCATCCACCAAAAGATTTGGAGGAGAGGATAGAAGACATTGTAACAGGGATGAGATGTAGAGTCCAGAAGAAGAATGGGATTTTGAAAGTGATACAAGATATCAAAGCACAGAAATGTGTAGGTAGTCTTTCAGTGATCATAGAGGTATTTGAAATTAGTCCAACATTGTATGTAGTAGAGCTAAGTAAGTCTTGTGGAGATGCTTCTGCATATAGACAGGTGGTGAGAAAATGA 1287 0.4025 MVIVNLGRKEGHGKRLGKYELGKTLGEGNFGKVKLARDTDSGKLFAVKILEKSRIIDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKAKIYMVLEYVNGGELFDKIASKGKLGEAEGRKIFQQLTDGVSFCHSKGVFHRDLKLENVLLDAKGNIKITDFNLSALPQHFREDGLLHTTCGSPNYVAPEILANKGYDGGTSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPRWLSPGAQNIIKRMLDPNPKSRITMAMIKEDEWFKEGYTPANPDNEEEGVYIDDDEAFSIHNASLESDQGSPTSPPLVNAFQLIGMSSSLDLSGLFEKEDVSERKLRFTSTHPPKDLEERIEDIVTGMRCRVQKKNGILKVIQDIKAQKCVGSLSVIIEVFEISPTLYVVELSKSCGDASAYRQVVRK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2273 428 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Pvu9g2273 428 Pfam NAF domain 317 374 IPR004041 GO:0007165
Pvu9g2273 428 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2273 428 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2273 428 PANTHER CBL-INTERACTING PROTEIN KINASE 21 12 426 - -
Pvu9g2273 428 Gene3D Transferase(Phosphotransferase) domain 1 10 315 - -
Pvu9g2273 428 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2273 428 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Pvu9g2273 428 CDD CIPK_C 319 425 - -
Pvu9g2273 428 PANTHER - 12 426 - -
Pvu9g2273 428 Gene3D Kinase associated domain 1, KA1 316 428 - -
Pvu9g2273 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pvu9g2273 428 SUPERFAMILY Protein kinase-like (PK-like) 15 304 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2273 Pvu-Chr9 32640345 32647796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2273 82 428 CBL-interacting serine-threonine protein kinases AT3G17510 68.012 2.22e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu9g2273 Pkinase 6.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2273 K07198 - gmx:100815660 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1260 3 30064592 30068544 Pvu9g2273 9 32640345 32647796 PCT