Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2198 ATGCTCCCAGCCGCCGGAGCCGTCGCGTTACACTCTTCTCTTTGCTCCACCCCTTCTGAGAAACCATACTCTCCTCTAAGAACAAACCTTCTTCTTGTGGCACCCAAACCCAAAAGCATCCTCCAAAACCACCCACTTTATCCCCCAACCCACGCCAAACTCTCCCTTGAATTCAAAGAGAAAATTCTCTGCCTTGAGGTAATGGGTATTGATGCAGGAAAAGCAATCTGCCAAAACCCTGATCTCCGTACAGCCACCATGGAATCCATTCAATCCATCATCACCTTCCTTTTCTCCAATGGCATTCTGGAAAAGGACCTGCCCAGAATCTTTGGCATGTGCCCCAAGGTTCTCACCGCTGACATCAAAACTGATCTCTCCCCAGTTTTTGATTTCATCTTGAATGAACTCAAAGTTCCCGAACATAGCTTCAGGAGGGTGGTCAATAAGTGCCCAAGATTGCTTGCATCCAGTGTGAAAGATCAGCTTAGACCAGCTTTGGTTTACCTAAGGAGACTTGGATTCAAGGATTTGGGGGCCTTGGCTTATCAAGATTCTGTTCTCTTGGTGTCTAATGTAGAACACACCCTCATCCCTAAACTTAAATTTCTGGAGACTTTGGGACTTTCCAAGGATGAGATTAGGAGTATGGTGTTGAGATGTCCAGCACTGCTCACTTTCAGTATAGAAAATAATTTTCAGCCAAAGTATGAGTATTTAGCTGGGGAAATGGGGAGAAAATTGGAGGAGCTGAAGGAGTTTCCTCAGTACTTTGCTTTTAGTTTGGAGAACAGGATAAAACCTAGACACATGGAGGTTGTGCAGAGTGGGATCACTTTACCTTTGTCAGTGATGCTTAAAAGCAATGATGAAGAATTTAGGGAGTTGTTAAAGCAGGGGGGTGGTTGA 909 0.4499 MLPAAGAVALHSSLCSTPSEKPYSPLRTNLLLVAPKPKSILQNHPLYPPTHAKLSLEFKEKILCLEVMGIDAGKAICQNPDLRTATMESIQSIITFLFSNGILEKDLPRIFGMCPKVLTADIKTDLSPVFDFILNELKVPEHSFRRVVNKCPRLLASSVKDQLRPALVYLRRLGFKDLGALAYQDSVLLVSNVEHTLIPKLKFLETLGLSKDEIRSMVLRCPALLTFSIENNFQPKYEYLAGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGITLPLSVMLKSNDEEFRELLKQGGG* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2198 302 PANTHER CGI-12 PROTEIN-RELATED 21 299 IPR003690 GO:0003690|GO:0006355
Pvu9g2198 302 Pfam mTERF 65 176 IPR003690 GO:0003690|GO:0006355
Pvu9g2198 302 Pfam mTERF 188 293 IPR003690 GO:0003690|GO:0006355
Pvu9g2198 302 Gene3D Transcription termination factor 3, mitochondrial 82 299 IPR038538 -
Pvu9g2198 302 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 299 - -
Pvu9g2198 302 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Pvu9g2198 302 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Pvu9g2198 302 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Pvu9g2198 302 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Pvu9g2198 302 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2198 Pvu-Chr9 31538832 31540255 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu9g2198 mTERF 5.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2198 K15032 - gmx:100788221 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2198 9 31538832 31540255 Pvu9g2198 9 31538832 31540255 ECH