Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2197 ATAAAACGAGAAATATCAACAATGAAACTTATTAGACACCCAAATGTCATACGTATGTATGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTCGTGACTGGTGGAGAGTTGTTTGATAAAATTGCACGCAGCGGGAGGTTGAAAGAAGATGGAGCAAGAAAATATTTTCAACAGCTTATATGTGCTGTGGATTATTGTCATAGTAGAGGTGTTTTTCATAGAGACTTAAAGCCTGAGAATTTGTTGCTGGATGCTAATGGAGTGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGCGGTACGCCAAATTATGTTGCTCCAGAGGTGATTCACAACAAAGGTTATGATGGTGCAAAGGCAGATCTATGGTCATGTGGTGTTATTCTGTTTGTTTTAATGGCAGGCTATCTGCCCTTTGAAGAAACCAATCTAACGGCTTTATATAAAAAGATTTACAAGGCTGAGTTCACGAGTCCTCCATGGTTCTCTTCAAGTGCCAAGAAACTAATCAACAGAATACTTGATCCAAATCCTGCCACTAGGATTACAATTGCTGAGGTCATTGAGAATGATTGGTTCAAGAAGGGATATAAGCCTCCCGTATTTGAACAGGATAGTGTTAGTCTTGATGATGTAAATTCTATTTTCAGCGAATCTATGGATTCGCAAAATCTTGTAGTTGAGAGGCGTGAAGAGGGGCATGCAGCACCAGTGACAATGAATGCCTTTGAGCTTATATCTAAATCTCAAGGTCTCAACCTTAGTAGTCTATTTGAGAAGCAAATGGGACTTGTTAAAAGGGAAACACGATTCACGTCCAAATGTTCAGCAGATGAAATAATTTCAAAAATTGAGGAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGGGAAAAGACTGGGCGGAAAGGTCATCTATCTGTAGCCACTGAGATCTTAGAGGTAGCCCCTTCGCTATACATGGTTGAGCTGCGTAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAATCTTGCTACTGGGCTGAAAGATATTGTTTGGAAAGCAGAGCCTATCGATGAAGGAAAACATGATGCCAATCCATCAAAATAA 1182 0.3968 IKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDGARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLTALYKKIYKAEFTSPPWFSSSAKKLINRILDPNPATRITIAEVIENDWFKKGYKPPVFEQDSVSLDDVNSIFSESMDSQNLVVERREEGHAAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISKIEEAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLATGLKDIVWKAEPIDEGKHDANPSK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2197 393 SUPERFAMILY Protein kinase-like (PK-like) 2 238 IPR011009 -
Pvu9g2197 393 Gene3D Phosphorylase Kinase; domain 1 1 40 - -
Pvu9g2197 393 CDD CIPK_C 259 374 - -
Pvu9g2197 393 SMART serkin_6 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2197 393 Gene3D Transferase(Phosphotransferase) domain 1 41 218 - -
Pvu9g2197 393 Pfam Protein kinase domain 2 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2197 393 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 383 - -
Pvu9g2197 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Pvu9g2197 393 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2197 393 Gene3D Kinase associated domain 1, KA1 253 378 - -
Pvu9g2197 393 ProSiteProfiles NAF domain profile. 253 277 IPR018451 GO:0007165
Pvu9g2197 393 PANTHER SERINE/THREONINE KINASE 1 383 - -
Pvu9g2197 393 Pfam NAF domain 255 315 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2197 Pvu-Chr9 31532532 31536414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2197 23 389 CBL-interacting serine-threonine protein kinases AT1G30270 82.561 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu9g2197 Pkinase 1.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2197 - - gmx:100788746 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1728 3 37599618 37603457 Pvu9g2197 9 31532532 31536414 PCT