Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2167 ATGTGTGTGCAGGATGCAGAGAAAGATAAGGATAAAACCTCAACAAATTCATGGCCTTTGCATTGTCACCTTTTGCTCGCCTCCCACATGGACAAAACAAGATCTTTTTTCACAACTTCAACTAATGACACCACTCATATCACTGTTCAAAGTTCTATTCCTCTAGAAAGCATTTATGAGGACGCGGTGATTGCAGACAAGAAACAGAATCAGATGAATTTGGCCCCGGCTCTTCGGTCTGGAGAGTGGTCTGACATAGGAGAACGCCCTTACATGGAGGACACTCACATATGCATTGGAGACTTGGCAAAGAAATTTAGTTATAATGCACTTTCTGGGGAAGCTGTTTCCTTTTATGGAGTATTTGATGGACATGGAGGGAAGAGTGCAGCACAATTTGTACGTGATAATCTGCCAAGATTTATTGTTGAGGATGTTAACTTTCCTTTGGAGCTTGAGAAGGTGGTCAAAAGGTCATTTTTGGAGACTGATGCTGCATTTCTAAAGTCATCCTCTCAAGAGCCTTCACTTTCTTCTGGTACAACTGCTTTAACTGCAATTATATTTGGAAGGTCTTTACTTGTAGCTAATGTGGGAGACTGCCGAGCTGTCTTGTCCCGCCATGGAAGAGCCATAGAAATGTCTAAAGATCATAGGCCAAACTGTGTCAATGAAAAGACACGGGTTGAGTCCCTAGGTGGCTTCATTGACGATGGTTACCTGAATGGTCAGTTAGGAATTACTCGCGCTATTGGAGATTGGCACCTTGAAGGAATGAAGGAAACGAGTGAAAGAGGAGGACCACTGAGTGCTGAACCTGAACTTAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATTGCTAGTGATGGAATATGGGATGTTTTTAGTAGCCAAAATGCTGTGGATTTTGCTAGGAGGAGGCTTCAAGAGCACAACGATGAGAAACTATGCTGCAAGGAAATAGTGCAGGAAGCAATCAAGAGAGAATCAACTGATAACTTGACAGTTGTGATGGTATGTTTTAACTCAGATCCTCCAACACCTGTGGCTGTGGAAAGAACACGAGTAAGAAGAAGCATATCTGTAGAAGGACTTCAGAATCTTAAATGCCTGCTAAAAGAATAA 1134 0.4189 MCVQDAEKDKDKTSTNSWPLHCHLLLASHMDKTRSFFTTSTNDTTHITVQSSIPLESIYEDAVIADKKQNQMNLAPALRSGEWSDIGERPYMEDTHICIGDLAKKFSYNALSGEAVSFYGVFDGHGGKSAAQFVRDNLPRFIVEDVNFPLELEKVVKRSFLETDAAFLKSSSQEPSLSSGTTALTAIIFGRSLLVANVGDCRAVLSRHGRAIEMSKDHRPNCVNEKTRVESLGGFIDDGYLNGQLGITRAIGDWHLEGMKETSERGGPLSAEPELKLMTLTKEDEFLIIASDGIWDVFSSQNAVDFARRRLQEHNDEKLCCKEIVQEAIKRESTDNLTVVMVCFNSDPPTPVAVERTRVRRSISVEGLQNLKCLLKE* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2167 377 Gene3D - 60 348 IPR036457 -
Pvu9g2167 377 SMART PP2C_4 69 342 IPR001932 -
Pvu9g2167 377 Pfam Protein phosphatase 2C 91 336 IPR001932 -
Pvu9g2167 377 SUPERFAMILY PP2C-like 74 346 IPR036457 -
Pvu9g2167 377 SMART PP2C_SIG_2 94 344 IPR001932 -
Pvu9g2167 377 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 365 - -
Pvu9g2167 377 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Pvu9g2167 377 PANTHER PROTEIN PHOSPHATASE 2C 1 365 IPR015655 GO:0004722|GO:0006470
Pvu9g2167 377 CDD PP2Cc 79 344 IPR001932 -
Pvu9g2167 377 ProSiteProfiles PPM-type phosphatase domain profile. 79 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2167 Pvu-Chr9 31032275 31035731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2167 68 375 PP2C-type Phosphatase Gene Family AT2G25620 56.774 3.51e-128 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pvu9g2167 PP2C 6.2e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2167 K14803 - gmx:100813157 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2167 9 31032275 31035731 Pvu9g2167 9 31032275 31035731 ECH
Pvu3g1799 3 38505425 38508282 Pvu9g2167 9 31032275 31035731 PCT