Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2164 ATGGCTGGAACGCTTCCAGGAGTTGAATGTGCAAGAAGGAGAAGATTCCATAGATGCTTGGATTCAAACTCAACTTCTTTAGCTTCACATGTATCCACAAGGCGCTCTTCTTTTGGTTTGTATGCAAGTAACCATGGATATTGTTCTTCCTTGTCCACTTCACAGCAAAGAGACATGTTATACAAGAGACACCCTGAGGAGGATATGGTAGGAGCAGCCAGAGAAGCCAGACAGAGATTGGATGACAAGTTTAGAGCACAAAGGATGTCAGATAACAAAAGACAAAACAGTACAACATGTGTGGAGGGCGAAAGAACAAGGATAACAGAGTTGCACACAGAGGTATATGGGTCAAAGAAGAGTGGTGCAAGGAAATTCAGTTGGACTAGATGGAGCTGGAAGGCCTCTGAACAAGAGGACTGTGCCGTGTGCTTGGAATCATTCAGAGTTGGAGAGACACTGATCCATCTTCCTTGTGCACATAAGTTCCATGACAGATGCTTGAAACCATGGTTGGAAAACAATTCTCATTGTCCATGTTGCAGAACAACCATTCTTTCCCTCTAG 567 0.4392 MAGTLPGVECARRRRFHRCLDSNSTSLASHVSTRRSSFGLYASNHGYCSSLSTSQQRDMLYKRHPEEDMVGAAREARQRLDDKFRAQRMSDNKRQNSTTCVEGERTRITELHTEVYGSKKSGARKFSWTRWSWKASEQEDCAVCLESFRVGETLIHLPCAHKFHDRCLKPWLENNSHCPCCRTTILSL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2164 188 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 184 - -
Pvu9g2164 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 187 IPR013083 -
Pvu9g2164 188 Pfam Ring finger domain 140 182 IPR001841 -
Pvu9g2164 188 CDD RING-H2_PA-TM-RING 140 182 - -
Pvu9g2164 188 SMART ring_2 141 181 IPR001841 -
Pvu9g2164 188 ProSiteProfiles Zinc finger RING-type profile. 141 182 IPR001841 -
Pvu9g2164 188 SUPERFAMILY RING/U-box 128 186 - -
Pvu9g2164 188 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2164 Pvu-Chr9 31015401 31017442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2164 1 85 C3H Transcription Factor Family AT2G15580 47.368 2.85e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2164 - - gmx:100527583 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2164 9 31015401 31017442 Pvu9g2164 9 31015401 31017442 ECH