Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2158 ATGAAGTATTTTTCTGTCATGTTTCATGCATTCTGTTATATATTTGTCCACTTGATTTCTATCTTTACGTTGAACCCGCTATGGCTTAGCACAAACATGATTGTCTTTGCATCAGGCAACAATACTGATCATTTGGCACTACTCAAATTCAAAGAATCCATATCCAGTGATCCTTACGGAGTTTTGCTATCTTGGAATAGTTCTACTCACTTTTGTAAATGGGATGGAATCACATGCAATTCCATGCAAAAAAGAGTTACAAAGTTAGACTTGAAGAAGGGGTACAAGTTGAAGGGATTCATACCTCCTCACCTGGGCAATCTCTCTTACATGAGAATCTTGTACCTTGACAACAACTTCCTGTACGGAAACATCCCACAAGAATTGGGACAATTGTCACAACTTCAGGAGCTCTCTGTTGGAAACAACTCATTGGTAGGAGAAATTCCTACAAACTTGACAGGTTGCACTAATCTCAAATTCCTATACTTATGTGGGAACAATCTGATTGGAAGAATACCAATAGAAATTAGCTACCTTCATAAGCTTCAAAGTTTGAATGTTGCGGTCAATAAGTTAACAGGAGGAATCCCATCGTTCCTAGGAAATCTTTCTGCTCTACATCTTCTCTCAGTGGGTATGAACAACTTAGAGGGAGAAGTTCCACATGAATTGTGTCACCTAAAAGACTTGGTAAAGATATTTGTAGCTGTCAACAATTTGATTGGAACATTTCCTTCTTGCTTTTACAACATCTCATCTCTGACTGTGATCTCAGCTACAGGAAATCAGTTTAATGGATCTCTTCCACCGAACATGTTCCACACCCTCCCCAATCTCCAACAGTTTTATATTGCTCTAAATCAAGTCTCAGGTTCAATCCCACCTTCCATTACAAATGCATCTATCCTTTCATTACTTGAGATAAGTGCCAATCAATTCACAGGACAAGTTCCAGCTTTGGAAAAGCTACAAGATCTTTATTATCTAGGTTTGTCTCACAACAATCTAGGTGACAATTCAACTAATGATTTGAAGTTTTTTAAATCATTGACAAATTGTAGTAGTTTGCAAATGTTGGATATCTTTGACAATAATTTTGGAGGTCAATTGCCAAATTCTTTAGCCAATTTGTCCACCGCACTCAACCAGTTGTATCTTGGAGCTAATATGATATCAGGAGATATTCCTACATCAATGGGAAATCTAATTGGCTTGACTGAATTGGCGATGGAATTTAACCGCTTTAGTGGGATTATTCCATCAGGTTTTGGAAAGTTTCAAAAAATGCAAAAGTTAGTCTTAAGTGGAAATCAGTTGTCAGGACACATAGGAGACTTTGTTGGCAACCTTAGTCAATTGTTTTTTTTGGATATGAGAAGAAATATGTTAGAAGGAAATATCCCTTCGAGTATAGGAAATTGCCAAAAGTTACAACATCTGGGTCTTTCACAAAACAATTTTACAGGAACCATACCTTTAGAGATCTTTAATATTTCCTCTTTGACAAACTTGTTGAAATTGTCAGGAAACTCATTGAGTGGCAGTATACCAAAAGAAGTGGGAAAGCTAAAAAATGTTGATTATCTAGATGTGTCTGAGAATCAGTTGTCTGGTCACATTCCTGAAACTATTGGAGAATGCATAACATTGGAGTACCTTTATTTGCAAGGAAATTCTTTACAGGGAAGCATACCATCCTCTTTGGCATCACTCAAAGGACTTCAACGTTTAGACCTGTCACGAAACAACTTGTCTGGATCAATCCCTACTGATTTGCAGAATATTTCTTTCTTGGAATATTTCAATGTATCCTTCAACATGTTGGATGGCGAAGTGCCAACTGGAGGTGTGTTTCAAAATGCAACCGGCTTTGTGGTGAATGGAAATGATAACCTTTGTGGAGGTATTTCCAAACTGCACCTACCACCATGTCTTTTCAAAGGTAAGAAACCTGCAAAACACCTTAAGTTTAGGTTGATAACAGTGGCAGTTAGTGTGGTTGTTTTTCTTCTCATATTGTCAATTATCCTAACTATCCACTGGATGAGAAGAAGGAATAACAAACCATCTTTGGATTCAACAACGATTGACCAGCTAGCTAAAGTTTCATACCAAAGCCTACACAATGGAACTGATGGGTTCTCAGCAACAAATTTGATTGGCTCTGGAAATTTTAGCTCTGTCTATAAAGGAACTCTTGAGTTCGAAGACAAAGTTGTTGCTATAAAGGTCCTAAATCTTCAAAAAGAAGGATCCCACAAGAGCTTCATAGCTGAATGCAACACACTCAAAAGTATTAAACATCGAAATCTGGTTAAGATTTTAACATGCTGTTCAAGCACAGACTACAAAGGTCAAGAATTTAAAGCTTTGATTTTTGAGTACATGAAGAATGGAAGCTTAGAACAATGGCTACATCCAAGGACACTGGGTCTAGAACAACTTCCAAGATTATTAAACCTTGGTCAAAGATTAAATATCATCATTGACGTTGCTTCTGCAGTACATTATCTTCATCATGAATGTGAGCAATCGATTGTTCATTGTGATTTAAAGCCAAGCAATGTTCTTCTTGATGATAACATGACTGCTCGTGTGTCTGATTTTGGCATAGCAAGAATTCTCTCGACTATTAATGGTATTGGTAAGCAAACGAGTACAATTGAGTTCAAGGGGACAATTGGCTATGCTCCCCCTGAGTATGGAATGGGTTCTGAGGTGTCTATGAATGGTGACATGTATAGTTTTGGGATCCTTTTATTGGAAATGTTTACTGGAAGAAGACCCACAGAAGAAATCTTTAAAAATGGTCAAAATTTGCATAAGTTTGTGGAAAATTCATTGCTTGGTAATGTCTTACAAATTTTGGACCCAACACTTGTTCTAAATCATGAAGGAGCAACAATAGAAAAAGAGAACAGTCAAAATCTTACTGCAGTTGATGAAAAGTACTTAGTTTCAGTCTTTAAGATTGGACTTGCTTGCTCAATGGAATCACCCAAAGAAAGAATGCATATTATGGAGGTCACTAAAGAACTAAACAAAATCAGAAAAGCATGGTGCGGAGGCATTGACAGAGAGAGTAGAATGGTCAGCGACAGAGCAGATGCCATAAATGTAGTTTAA 3129 0.3723 MKYFSVMFHAFCYIFVHLISIFTLNPLWLSTNMIVFASGNNTDHLALLKFKESISSDPYGVLLSWNSSTHFCKWDGITCNSMQKRVTKLDLKKGYKLKGFIPPHLGNLSYMRILYLDNNFLYGNIPQELGQLSQLQELSVGNNSLVGEIPTNLTGCTNLKFLYLCGNNLIGRIPIEISYLHKLQSLNVAVNKLTGGIPSFLGNLSALHLLSVGMNNLEGEVPHELCHLKDLVKIFVAVNNLIGTFPSCFYNISSLTVISATGNQFNGSLPPNMFHTLPNLQQFYIALNQVSGSIPPSITNASILSLLEISANQFTGQVPALEKLQDLYYLGLSHNNLGDNSTNDLKFFKSLTNCSSLQMLDIFDNNFGGQLPNSLANLSTALNQLYLGANMISGDIPTSMGNLIGLTELAMEFNRFSGIIPSGFGKFQKMQKLVLSGNQLSGHIGDFVGNLSQLFFLDMRRNMLEGNIPSSIGNCQKLQHLGLSQNNFTGTIPLEIFNISSLTNLLKLSGNSLSGSIPKEVGKLKNVDYLDVSENQLSGHIPETIGECITLEYLYLQGNSLQGSIPSSLASLKGLQRLDLSRNNLSGSIPTDLQNISFLEYFNVSFNMLDGEVPTGGVFQNATGFVVNGNDNLCGGISKLHLPPCLFKGKKPAKHLKFRLITVAVSVVVFLLILSIILTIHWMRRRNNKPSLDSTTIDQLAKVSYQSLHNGTDGFSATNLIGSGNFSSVYKGTLEFEDKVVAIKVLNLQKEGSHKSFIAECNTLKSIKHRNLVKILTCCSSTDYKGQEFKALIFEYMKNGSLEQWLHPRTLGLEQLPRLLNLGQRLNIIIDVASAVHYLHHECEQSIVHCDLKPSNVLLDDNMTARVSDFGIARILSTINGIGKQTSTIEFKGTIGYAPPEYGMGSEVSMNGDMYSFGILLLEMFTGRRPTEEIFKNGQNLHKFVENSLLGNVLQILDPTLVLNHEGATIEKENSQNLTAVDEKYLVSVFKIGLACSMESPKERMHIMEVTKELNKIRKAWCGGIDRESRMVSDRADAINVV* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2158 1042 SMART LRR_typ_2 451 475 IPR003591 -
Pvu9g2158 1042 SMART LRR_typ_2 524 548 IPR003591 -
Pvu9g2158 1042 SMART LRR_typ_2 132 156 IPR003591 -
Pvu9g2158 1042 SMART LRR_typ_2 572 595 IPR003591 -
Pvu9g2158 1042 SMART LRR_typ_2 204 228 IPR003591 -
Pvu9g2158 1042 SMART LRR_typ_2 403 426 IPR003591 -
Pvu9g2158 1042 Gene3D Transferase(Phosphotransferase) domain 1 797 1030 - -
Pvu9g2158 1042 Gene3D Ribonuclease Inhibitor 36 94 IPR032675 -
Pvu9g2158 1042 Gene3D Ribonuclease Inhibitor 339 651 IPR032675 -
Pvu9g2158 1042 CDD STKc_IRAK 721 1017 - -
Pvu9g2158 1042 PANTHER LRR RECEPTOR-LIKE KINASE 28 1021 - -
Pvu9g2158 1042 SUPERFAMILY L domain-like 381 635 - -
Pvu9g2158 1042 Gene3D Phosphorylase Kinase; domain 1 695 796 - -
Pvu9g2158 1042 ProSiteProfiles Protein kinase domain profile. 715 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2158 1042 Gene3D Ribonuclease Inhibitor 95 338 IPR032675 -
Pvu9g2158 1042 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Pvu9g2158 1042 SUPERFAMILY Protein kinase-like (PK-like) 689 1014 IPR011009 -
Pvu9g2158 1042 SMART serkin_6 715 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2158 1042 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Pvu9g2158 1042 Pfam Protein kinase domain 718 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2158 1042 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Pvu9g2158 1042 SUPERFAMILY L domain-like 40 337 - -
Pvu9g2158 1042 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Pvu9g2158 1042 PANTHER OS04G0122200 PROTEIN 28 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2158 Pvu-Chr9 30934907 30938517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2158 40 1021 Receptor kinase-like Gene Family AT3G47570 45.619 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu9g2158 Pkinase 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2158 - - gmx:100782685 1463.74