Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2150 ATGGAGATTTTCAACTGCTTCTACATCAATCTTCTTGCTACCTTCATGTTATCAGCAGTTCTAGCAATCGACCCTTACTCAGAAGCACTCCTCAGCCTAAAACATGAACTTGTAGATGATGATAACAGCTTGCGCAACTGGGTGGTACCCTCCTCAGGAGAAAAATTAACTGGGAAATACTATGCGTGTTCTTGGTCAGGTGTCAAGTGTAACAATGACTCAACCACTGTGACTTCTATAGATCTTTCCATGAAGAAACTGGGAGGTGTATTGTCTGGGAAGCAATTCAGCATCTTCACAAACCTCACTAATCTCAACCTCAGCTACAATTTCTTCTCAGGACAGCTTCCAGCAGAGATTTTCAACCTCACCAGCCTAACAAGCTTGGACATCAGCAGAAACAACTTTTCTGGTTCCTTCCCTGGTGGAATTACTAGGCTCCAAAATTTGGTTGTACTTGATGCCTTTAGCAACAGTTTTTCAGGGTCGTTGCCTGCTGAATTTTCACAGCTAGCAAACCTTAAAGTTCTCAATCTAGCTGGGAGCTACTTCAGAAATTCAATTCCATCTGAATATGGTTCTTTTAAAAGCCTTCAGTTTCTTCATCTTGCCGGAAATTCTCTTTCAGGAAGTATACCTCCAGAACTGGGTAACCTCAAAACAGTGACCCATATGGAGATTGGGTACAACCTATACCAGAGTTTTATACCACCCGAACTAGGTAACATGAGTCAGCTTCAGTATCTTGACATAGCAGGAGCAAATCTATCAGGTCATATACCAAACCAACTCTCCAACCTCACCAGTTTGCAATCACTTTTCCTGTTCAGGAACCAGCTCACAGGAACAGTGCCTAGTGAGCTCAGTAACATTCAATCCCTGGCAGATTTAGATCTCTCTGATAACTTCCTCTCAGGGTCCATTCCCGAAAGCTTCTCAGCCCTGGAGAACCTAAGACTACTCAGCCTCATGTACAATGACATGAGTGGCACTGTTCCTGAAGGAATTGCGCAACTCAAATCCTTGGAAACTCTTCTCATTTGGAACAATCGCTTCTCTGGGTCACTTCCGCAGAGCTTAGGGAGGAACTCCAAACTCAAGTGGGTGGATGCTTCCACAAACAACTTAGTTGGCAGCATACCACCAGACATCTGTGTGAATGGAGTACTATTTAAGCTAATACTGTTTTCAAACAACTTCACTGGTCAGCTCTCATCAATCTCCAATTGTTCTTCACTCGTTCGCCTTCGCCTAGAAGATAATTCATTTTCAGGAGAAATCACTTTGAAATTCATCCATCTTCCTCATATCTTATACTTCGATCTCTCCCGGAACAACTTTGTTGGTGGCATTCCCTCAGATATTTCTCAAGCCACTCAACTAGAGTATTTTAATGTCTCTTATAATCCGCAATTAGGAGGTACCATCCCTGCACAAACGTGGTCTTTGCCCCAACTTCAAAATTTTTCAGCATCTTCTTGTGCTATTTCTGGTGGTCTTCCCCTATTTGAGTCCTGCAAATCAATTTCAGTTATTGATCTAGATAGCAATAACTTATCTGGAATCATCCCAAACAGTGCTTCCAAATGTCGAGTTCTTGAGAGAATCAACCTATCCAACAATAACTTAACAGGTCATATACCTGATGAGCTTGCAAGTATTCCGGTTCTTGTTGTGGTGGACCTATCAAACAACAAGTTCAATGGCCTCATACCTGCTGAGTTTGGTAGTTGTTCAAGTTTACAACTTCTGAATGTGTCTTTTAACAATATCTCTGGTTCAATACCCACAGGAAAGACATTCAAATTGATGGGAAAAAGTGCATTTATCGGAAATTCAGAGCTATGTGGAGCACCCCTGAGATCATGTCCTGATTCAGTTGGAATATTGGGCAGAAAAGGCACGTGGAAGATTACACATATTGTGCTACTCTCTGTAGGGTTGCTGATAGTTCTTCTAGGACTTACTTTTGGAATATTTTATTTGAGAAGGGGGATAAAAAGTCAATGGAAGATGATCTCCTACGCTGGTCTCCCTCAATTCACAGCAAATGATGTTTTGACGAGCCTCACTGCTACAAAACCAACAGAAGTTACATCACCATCACCAGCAGTTGCAAAGGCTGTTCTGCCTACAGGAATAACAGTTTTGGTCAAGAAGACAGAATGGGAAGCTAGGAGCATCAAGGTTGTGTCAGAATTTATAATGAGACTGGGAAATTCAAGGCACAAGAATTTAATCAGACTACTGGGGTTTTGCCACAACCAGCATTTAGTCTATCTTTTGTATGATTACTTGCCCAATGGGAATTTGGCTGAGAAAATGAAAATGAAATGGGATTGGTCAGCAAAATTCAGAACAGTGGTTGGAATAGCAAGGGGTCTATGCTTTCTTCACCATGAATGTTACCCAGCAATACCCCACGGAGACTTGAAGCCTAGCAATGTTGTATTTGACGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACAGGTTTTGAGGTTGAGCAAAGACTCATCACCTACCATAACTAAGTGGGAAGCAGAATACGATGAGGTCACAAAAGAAGAACTGCGCATGGATATCTACAATTTTGGGGAGATGATTCTAGAAATTTTAAGTGGCGGAAGGTTGACAAATGCAGGAGCCAGCATACACAGCACACCATGGGAGGATCTCTTGAGAGAAATTTATAATGAGAACGAAGCAAGCTCCGCAAGTTCATTGCATGAGATTAAACTGGTTCTTGAGGTTGCTATGTTTTGCACCAGAAGCAGGTCATCAGATCAGCCATCAATGGAAGATGTTCTCAAGCATCTGTCAGGGCTAAAGCATATAGATGATGGCAGAACTTCGAAAGAAGAGCAATAA 2877 0.4192 MEIFNCFYINLLATFMLSAVLAIDPYSEALLSLKHELVDDDNSLRNWVVPSSGEKLTGKYYACSWSGVKCNNDSTTVTSIDLSMKKLGGVLSGKQFSIFTNLTNLNLSYNFFSGQLPAEIFNLTSLTSLDISRNNFSGSFPGGITRLQNLVVLDAFSNSFSGSLPAEFSQLANLKVLNLAGSYFRNSIPSEYGSFKSLQFLHLAGNSLSGSIPPELGNLKTVTHMEIGYNLYQSFIPPELGNMSQLQYLDIAGANLSGHIPNQLSNLTSLQSLFLFRNQLTGTVPSELSNIQSLADLDLSDNFLSGSIPESFSALENLRLLSLMYNDMSGTVPEGIAQLKSLETLLIWNNRFSGSLPQSLGRNSKLKWVDASTNNLVGSIPPDICVNGVLFKLILFSNNFTGQLSSISNCSSLVRLRLEDNSFSGEITLKFIHLPHILYFDLSRNNFVGGIPSDISQATQLEYFNVSYNPQLGGTIPAQTWSLPQLQNFSASSCAISGGLPLFESCKSISVIDLDSNNLSGIIPNSASKCRVLERINLSNNNLTGHIPDELASIPVLVVVDLSNNKFNGLIPAEFGSCSSLQLLNVSFNNISGSIPTGKTFKLMGKSAFIGNSELCGAPLRSCPDSVGILGRKGTWKITHIVLLSVGLLIVLLGLTFGIFYLRRGIKSQWKMISYAGLPQFTANDVLTSLTATKPTEVTSPSPAVAKAVLPTGITVLVKKTEWEARSIKVVSEFIMRLGNSRHKNLIRLLGFCHNQHLVYLLYDYLPNGNLAEKMKMKWDWSAKFRTVVGIARGLCFLHHECYPAIPHGDLKPSNVVFDENMEPHLAEFGFKQVLRLSKDSSPTITKWEAEYDEVTKEELRMDIYNFGEMILEILSGGRLTNAGASIHSTPWEDLLREIYNENEASSASSLHEIKLVLEVAMFCTRSRSSDQPSMEDVLKHLSGLKHIDDGRTSKEEQ* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2150 958 SUPERFAMILY RNI-like 284 597 - -
Pvu9g2150 958 ProSiteProfiles Protein kinase domain profile. 646 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2150 958 Gene3D Phosphorylase Kinase; domain 1 701 763 - -
Pvu9g2150 958 PANTHER UNNAMED PRODUCT 3 947 - -
Pvu9g2150 958 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Pvu9g2150 958 SUPERFAMILY Protein kinase-like (PK-like) 705 943 IPR011009 -
Pvu9g2150 958 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 3 947 - -
Pvu9g2150 958 Gene3D Ribonuclease Inhibitor 189 282 IPR032675 -
Pvu9g2150 958 SMART LRR_typ_2 267 291 IPR003591 -
Pvu9g2150 958 SMART LRR_typ_2 195 219 IPR003591 -
Pvu9g2150 958 SMART LRR_typ_2 339 363 IPR003591 -
Pvu9g2150 958 SMART LRR_typ_2 99 123 IPR003591 -
Pvu9g2150 958 SMART LRR_typ_2 554 577 IPR003591 -
Pvu9g2150 958 SMART LRR_typ_2 434 458 IPR003591 -
Pvu9g2150 958 Pfam Protein tyrosine and serine/threonine kinase 713 942 IPR001245 GO:0004672|GO:0006468
Pvu9g2150 958 Gene3D Ribonuclease Inhibitor 389 627 IPR032675 -
Pvu9g2150 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Pvu9g2150 958 Gene3D Transferase(Phosphotransferase) domain 1 764 958 - -
Pvu9g2150 958 SUPERFAMILY L domain-like 60 381 - -
Pvu9g2150 958 Gene3D Ribonuclease Inhibitor 25 188 IPR032675 -
Pvu9g2150 958 Gene3D Ribonuclease Inhibitor 283 388 IPR032675 -
Pvu9g2150 958 Pfam Leucine rich repeat 533 591 IPR001611 GO:0005515
Pvu9g2150 958 Pfam Leucine rich repeat 293 351 IPR001611 GO:0005515
Pvu9g2150 958 SMART serkin_6 705 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2150 Pvu-Chr9 30856211 30859816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2150 7 943 Receptor kinase-like Gene Family AT5G51350 54.421 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu9g2150 PK_Tyr_Ser-Thr 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2150 - - gmx:100782323 1608.58