Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2141 ATGCAGCAGGCTGATTCAACGGTTCTAAGCTTGAGGCCTGGCGGCGGTCGTGGCGGCGGAAGCAGGCTTTTTGCTCTCTCCTCCTCCTCTTTCACTTCCTCCGCCGATCTCCCTCTCACGCGCCCCCATGCGTCTTTCTCCCTCAAGACCGGAGATTCACGTTTTGAGGTTCGTGAACGTGTGCAATATACCAGAGATAAGCTTTTACAGCTTCAAGAGGTTATTGTTGACGTCCCTGATGATACTCTGAAAATTAAGCAAGATATAGAAGCTGAACTTTTTGGTGAAAATCAAAGTTGGGGAGGACGTGCTGACAGCAATCCTCCTCATCAACTACAAAATCGGTATCCCGAGACAGATAATCGTGATTGGCGTGGTCGTTCTGGACAACTTCCTGCTAGCCCAGATGAGAGGTCTTGGGAAAACCTCAGAGATAACAGTAGTCAGTTTGCAAGGACACAAATGTCTTCTACCCAAGGGGGAGGACCTACTCCTACACTAACCAAGGCTGAGGTTCCTTGGTCAGCCAGAAGGGGAAGTCTATCTGAAAAGGATCGTGTCTTAAAGACTGTGAAAGGAATACTGAATAAGTTAACTCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAATTGATTCTGGCATTACCTCTGCTGACATCTTGAAGGATGTCATTTCACTTATATTTGACAAGGCTGTTCTAGAACCAACATTTTGCCCAATGTATGCTCTTCTGTGTTCTGATCTGAATGAAAAACTGCCTCCATTCCCATCTGGGGAACCCGATGGGAAGGAAATCACCTTTAAGAGAGTATTATTGAATAATTGCCAGGAGGCATTTGAAGGTGTGGAACTAAAAAGGATGGCTGTCCCTGAGCAGGAGACGGAGCGTATGGACAAGGAAAGACTGCTCAAGCTTCGGACTCTTGGAAATATTCGTTTAATTGGTGAGCTATTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGAACCCCAGACAGCAAGTCTTGTCCTGTTGAGGAAAATGTGGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAACTTGATGAAAGTCCTAAATCGCGGCGTATAAATGATATGTACTTTAGTCAATTGAAAGAATTGAGCTCAAATCTACAACTTGTACCCCGGCTTAGGTTCATGATTCGAGATGTTCTAGACTTACGTGCTAGTAATTGGGTTCCTAGACGGGAAGAGATCAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAGAATCTTGGTTTGCGACCAGGTGCCACTGCAAGTATGAGAAATGCCCGTGGTGGTGTTCATGGAAATTTCAGCCCCGGGGGTTTCCCTATTTCCCGACCTGGTACAGGGGGTCTGATGCCTGGAATGCCAGGGAGCAGAAAGATGCCTGGGATGCCTGGATTTGATAATAGCAACTGGGAGATGCCTAAGTCTAGATCTATGCCAAGAGGAGACTTCTCAGGTGTTCAAGCTGCTGGACCCAACAGCCCTTTACTTTCCAAGCCCACAATCCTTAATTCAAAATTGCTACCTCAAGGGAGTAGTGGTATTGTAAGTGGAAGAAATAGTGCCCTAGTACATGGAGCTGCTACATTTTCTGCTCGACCGGCAAACTTTGGTGTAGGTCCTGAGACAGTATCTCAGCTCTCTTCACTTGATAAAACAGTTGCTCCTGTTCCTGTATCCTCTGGGAAGTCACAAGCACCATCTGGTGGATTGAATACTGATGATCTTCGACGCAAAACTATCTCTCTTCTACAAGAATATTTCAGTGTTCGGCTTTTGGATGAGGCATTACAGTGTGTGGAGGAATTGAAATCTCCTTCTTTTTACCCTGAGGTTGTTAAGGAAGCCATTTGCCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTAGCCAATCTCATGGAGTATCTATACATTAAGAAGATTCTTACTGCTATAGATATCGAGGCCGGCTGTTTGTTATTCGGTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAATCACCTAGTAATTTTGGTATGATAATTGGGAAACTAATTTTGGCTGGGGGATTAGATTTTAAGGTGGCGAGAGAGATTCTCAAGAAGGTGGAAGATGACATGTTCCAGAGAGAAATATTTGACAGTGCGGTAGGGGCCATTAAATCTTCTGCATCCGGACAAGCAGTGTTGGATTTACAAACATCTGATATTAAGGCCTGCCAGAGTCTGCTCAAGTGA 2283 0.4459 MQQADSTVLSLRPGGGRGGGSRLFALSSSSFTSSADLPLTRPHASFSLKTGDSRFEVRERVQYTRDKLLQLQEVIVDVPDDTLKIKQDIEAELFGENQSWGGRADSNPPHQLQNRYPETDNRDWRGRSGQLPASPDERSWENLRDNSSQFARTQMSSTQGGGPTPTLTKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSGEPDGKEITFKRVLLNNCQEAFEGVELKRMAVPEQETERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGTPDSKSCPVEENVEAICQFFNTIGKQLDESPKSRRINDMYFSQLKELSSNLQLVPRLRFMIRDVLDLRASNWVPRREEIKAKTITEIHSEAEKNLGLRPGATASMRNARGGVHGNFSPGGFPISRPGTGGLMPGMPGSRKMPGMPGFDNSNWEMPKSRSMPRGDFSGVQAAGPNSPLLSKPTILNSKLLPQGSSGIVSGRNSALVHGAATFSARPANFGVGPETVSQLSSLDKTVAPVPVSSGKSQAPSGGLNTDDLRRKTISLLQEYFSVRLLDEALQCVEELKSPSFYPEVVKEAICLALDKSPPCVEPVANLMEYLYIKKILTAIDIEAGCLLFGSLLDDIGIDLPKSPSNFGMIIGKLILAGGLDFKVAREILKKVEDDMFQREIFDSAVGAIKSSASGQAVLDLQTSDIKACQSLLK* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2141 760 MobiDBLite consensus disorder prediction 144 165 - -
Pvu9g2141 760 SUPERFAMILY ARM repeat 589 745 IPR016024 -
Pvu9g2141 760 SUPERFAMILY ARM repeat 182 412 IPR016024 -
Pvu9g2141 760 Gene3D - 589 758 - -
Pvu9g2141 760 SMART if4_15 188 409 IPR003890 GO:0003723|GO:0005515
Pvu9g2141 760 Gene3D - 179 410 - -
Pvu9g2141 760 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 759 IPR045208 GO:0003743
Pvu9g2141 760 MobiDBLite consensus disorder prediction 100 115 - -
Pvu9g2141 760 MobiDBLite consensus disorder prediction 96 170 - -
Pvu9g2141 760 Pfam MIF4G domain 188 409 IPR003890 GO:0003723|GO:0005515
Pvu9g2141 760 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 759 - -
Pvu9g2141 760 Pfam MA3 domain 595 707 IPR003891 -
Pvu9g2141 760 SMART ma3_7 595 707 IPR003891 -
Pvu9g2141 760 ProSiteProfiles MI domain profile. 594 716 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2141 Pvu-Chr9 30703654 30709565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2141 1 758 Eukaryotic Initiation Factors Gene Family AT5G57870 60.556 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2141 K03260 - gmx:100800438 1178.31