Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2135 ATGCAGCCCTGTAGCAGAGAAATGCAAGGAATCAACGCACTCTTCAACTCTTCCCAAATCTCCCTCCAGGACCTCCACACCACCACCAACCAGATCCAGAATTCACACATGAACAACCACCACCACCACCAACAACCACCACTCCAACACCAACTCCCTCACTTCGACCCAACCTCTCAGGATGACTTTCTCGACCAAATGTTCTCCTCCTGGCCCGACCTCAACCCAAACAAGCCCTTGTGGGACCCCAATAACCTCTCCGACCAAACCACTCCCTCCAACAACGACAACAACAATAATAACACCAATAACAATGTCGCTTTCCCCTACGACGAACCCTCCACTTTGGCCTCCAAGTTCCGCGACCACCAGATCAGCGCCTCCACAACCAAAGACGCTGCCGCAGCTCTCATAATCCAACACCAACTCCTCATGTCCAGAGACTCTCGGCTCCTTCACATGCCGCTTTCCTTACCTCAAAACGACGTCGTTGACGCCTCCTCCTTCAAATCCCCCAATCCCGGTGGTGACACTTCAGTGCAAGCTCTCTACAACGGCTTCGCCGGATCTCTGCATGGCGCAGGTCAAGCCTCCAACCAGGCTCAGCATTTTCAACATCCTCAGGGAAGTTCGAATCCGATACAGGGACAGAATTTTGGTGCGCCGGGTGCTGGGGCTGCGACGAACCAAGCTCCGGCGAGTGGCGCGCCGGCTCAGCCGAGGCAGAGGGTTCGTGCAAGGAGAGGTCAGGCCACGGACCCACACAGCATCGCTGAAAGGTTAAGAAGGGAGAGAATCGCAGAGAGAATGAAAGCCCTACAGGAACTGGTTCCCAATGCCAACAAGACAGATAAGGCGTCCATGCTAGATGAGATCATCGATTACGTGAAGTTCCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCAGCTGCTGTCGCACCCCTTGTTGCTGATATGTCTTCTGAGGGTGGCGGTGACTGCATCCAAGCGAACGGCGGCGTGGCCCTCGCGCCCAACTCGAACAGCAACCATAACCAAACGACAGCGTCAGCTTCAAATGACAGCCTGACCATGACGGAGCACCAGGTAGCGAAGCTGATGGAGGAAGACATGGGTTCCGCCATGCAGTACCTTCAAGGCAAGGGCCTGTGCCTCATGCCCATTTCCCTTGCCACTGCCATCTCCACTGCCACATGTCACACCAGGAACCCCTTGATCAGCGCCGCCTCCGGCAGCACCCAGACTCCCACCAACGCCGCCCCCGGCACACACGCCAACCCCGCCGTCGCGTCTAACGGCGAAGGCCCGTCCTCTCCGAGCATGTCCGTTCTGACAGTGCAGTCTGCCGTGGTGGGCAACGACGGCGCCGTCAAGGATGCTGCCTCCGTTTCGAAGCCGTGA 1416 0.5699 MQPCSREMQGINALFNSSQISLQDLHTTTNQIQNSHMNNHHHHQQPPLQHQLPHFDPTSQDDFLDQMFSSWPDLNPNKPLWDPNNLSDQTTPSNNDNNNNNTNNNVAFPYDEPSTLASKFRDHQISASTTKDAAAALIIQHQLLMSRDSRLLHMPLSLPQNDVVDASSFKSPNPGGDTSVQALYNGFAGSLHGAGQASNQAQHFQHPQGSSNPIQGQNFGAPGAGAATNQAPASGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGGVALAPNSNSNHNQTTASASNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLISAASGSTQTPTNAAPGTHANPAVASNGEGPSSPSMSVLTVQSAVVGNDGAVKDAASVSKP* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2135 471 MobiDBLite consensus disorder prediction 80 111 - -
Pvu9g2135 471 MobiDBLite consensus disorder prediction 194 257 - -
Pvu9g2135 471 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 416 - -
Pvu9g2135 471 Gene3D - 245 307 IPR036638 GO:0046983
Pvu9g2135 471 PANTHER TRANSCRIPTION FACTOR BHLH69 55 416 - -
Pvu9g2135 471 SMART finulus 256 305 IPR011598 GO:0046983
Pvu9g2135 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 250 299 IPR011598 GO:0046983
Pvu9g2135 471 MobiDBLite consensus disorder prediction 36 73 - -
Pvu9g2135 471 MobiDBLite consensus disorder prediction 413 447 - -
Pvu9g2135 471 MobiDBLite consensus disorder prediction 194 224 - -
Pvu9g2135 471 Pfam Helix-loop-helix DNA-binding domain 255 300 IPR011598 GO:0046983
Pvu9g2135 471 MobiDBLite consensus disorder prediction 36 112 - -
Pvu9g2135 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 248 310 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2135 Pvu-Chr9 30620719 30624721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2135 224 470 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.121 5.88e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu9g2135 HLH 1.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2135 - - gmx:100807286 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2135 9 30620719 30624721 Pvu9g2135 9 30620719 30624721 ECH