Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2130 ATGGGGAAGCACCAAAGACACAACAAAACCAATGCAAGCACTAACACTAACCTTAACGCAACCAACACTGTCCCCACCAAGGTCAAACGAACAAGAAGAAGTGTCCCTAGAGATTCCCCTCCTCAACGCAGCTCAATATACAGAGGAGTCACTAGGCACCGATGGACAGGCCGATATGAAGCTCATTTGTGGGACAAGAATTGCTGGAATGAGTCACAGAACAAGAAAGGACGACAAGGTGCTTATGACGATGAAGAGGCTGCAGCACACGCTTATGATCTAGCAGCATTGAAGTACTGGGGTCAAGATACCATCCTTAATTTTCCATTATCAACCTACCAGAATGAAGTGAAAGAAATGGAGTGTCAATCACGGGAAGAGTACATTGGATCATTAAGAAGGAAAAGCAGCGGTTTTTCTCGTGGAGTGTCTAAATACAGAGGTGTTGCAAGACACCATCATAACGGAAGATGGGAGGCTCGGATTGGCAGGGTTTTTGGCAACAAGTATCTTTACCTCGGAACTTACGCAACACAAGAAGAAGCTGCCACAGCATATGACATGGCAGCTATTGAATATCGAGGACTCAACGCCGTGACCAATTTCGACCTTAGCCGCTACATCAAGTGGCTTAAGCCCAACAACAACGATAACACTGTGAACTCTAACATTCTTCACGCTAACCCTAACCCTAATTCTGAGACCAACTCTACCCCAAGCTCTAATGAACAACAAGGGTTCAATTTTTTCCAGAGTCAAGAATCGACAATGGCTCAGCCTCGACCATCTGGCGCCACGTCAGCCCTAGGACTTTTGCTTCAGTCGTCCAAGTTCAAGGAGATGATGGAGATGACTTCCGCCGCGGATTTGTCGACGGAAAGGTCGGAGTCTGAGTTGCTGCCGTGCACATTTCCCGATGACATTCAGACCTATTTCGAGTGTGAAGATTCCAATATATATGGAGAAGGAGCTGAAAACATGTTCAGCGAGCTCAACAGCTTTGTGCCCCATATGTTCCATTGTGATGAGTTTGAGACTTGA 1041 0.463 MGKHQRHNKTNASTNTNLNATNTVPTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQDTILNFPLSTYQNEVKEMECQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNDNTVNSNILHANPNPNSETNSTPSSNEQQGFNFFQSQESTMAQPRPSGATSALGLLLQSSKFKEMMEMTSAADLSTERSESELLPCTFPDDIQTYFECEDSNIYGEGAENMFSELNSFVPHMFHCDEFET* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2130 346 SMART rav1_2 46 115 IPR001471 GO:0003700|GO:0006355
Pvu9g2130 346 SMART rav1_2 145 209 IPR001471 GO:0003700|GO:0006355
Pvu9g2130 346 SUPERFAMILY DNA-binding domain 144 205 IPR016177 GO:0003677
Pvu9g2130 346 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 329 - -
Pvu9g2130 346 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Pvu9g2130 346 PRINTS Ethylene responsive element binding protein signature 185 205 IPR001471 GO:0003700|GO:0006355
Pvu9g2130 346 CDD AP2 144 205 IPR001471 GO:0003700|GO:0006355
Pvu9g2130 346 SUPERFAMILY DNA-binding domain 45 111 IPR016177 GO:0003677
Pvu9g2130 346 MobiDBLite consensus disorder prediction 221 245 - -
Pvu9g2130 346 MobiDBLite consensus disorder prediction 1 49 - -
Pvu9g2130 346 ProSiteProfiles AP2/ERF domain profile. 46 109 IPR001471 GO:0003700|GO:0006355
Pvu9g2130 346 Pfam AP2 domain 144 195 IPR001471 GO:0003700|GO:0006355
Pvu9g2130 346 Pfam AP2 domain 46 101 IPR001471 GO:0003700|GO:0006355
Pvu9g2130 346 Gene3D AP2/ERF domain 46 111 IPR036955 GO:0003700|GO:0006355
Pvu9g2130 346 Gene3D AP2/ERF domain 144 205 IPR036955 GO:0003700|GO:0006355
Pvu9g2130 346 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 329 - -
Pvu9g2130 346 MobiDBLite consensus disorder prediction 7 29 - -
Pvu9g2130 346 ProSiteProfiles AP2/ERF domain profile. 145 203 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2130 Pvu-Chr9 30520376 30524486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2130 42 207 AP2-EREBP Transcription Factor Family AT5G57390 71.006 2.60e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pvu9g2130 AP2 3.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2130 K09285 - gmx:100804555 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1587 3 35757558 35760426 Pvu9g2130 9 30520376 30524486 PCT