Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2107 ATGGAAGGGAATGAGGCTAAGAGACTCGGTGGACCACCGAATTTTTCTACCTTAACACAGCATAGTAGCTTTCTTTCTCCAACCCAGAATTCCACTCTGAACAATGAAACAACTGAAGGCCATATGAGATACCGTGACTGCATTTTCACTCATGTGGATTCATCCCAAGTATTACACCATATTCCATTATACTGCTCCAGATTGCACCTTTCCAACAACACCAACAGTCCAAACACGTCATCGAACAGCAACAACAACAACAATGCTGACGAAGCAATTGCTCTCCTTGAGGACCGCAAGAAGAGGATGTTCTCAAACCGTGAATCAGCTCGCAGGTCCCGAATGCAGAAAAAGCAACAGATTGAGTCCCTTCAGTGTCACCTTGATCATCTACAAACACTGAATCGCCAACTCTCTGAAAAGATCATTTACTTGCTGGAATGTAACCAACAAATCCTCCAACACAATGCGCAACTCAAAGACAAGGTTTCTTACCTTCAAGTTGCGGTCTCTGAATTGTTGGGTCCTCCGGGACATGTCGATCAGAGTAACCACTTCCCCCACTGA 567 0.448 MEGNEAKRLGGPPNFSTLTQHSSFLSPTQNSTLNNETTEGHMRYRDCIFTHVDSSQVLHHIPLYCSRLHLSNNTNSPNTSSNSNNNNNADEAIALLEDRKKRMFSNRESARRSRMQKKQQIESLQCHLDHLQTLNRQLSEKIIYLLECNQQILQHNAQLKDKVSYLQVAVSELLGPPGHVDQSNHFPH* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2107 188 MobiDBLite consensus disorder prediction 13 36 - -
Pvu9g2107 188 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 184 IPR044521 -
Pvu9g2107 188 SUPERFAMILY Leucine zipper domain 99 153 IPR046347 GO:0003700|GO:0006355
Pvu9g2107 188 Gene3D - 97 172 - -
Pvu9g2107 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 96 145 IPR004827 GO:0003700|GO:0006355
Pvu9g2107 188 MobiDBLite consensus disorder prediction 1 36 - -
Pvu9g2107 188 Pfam Basic region leucine zipper 97 143 IPR004827 GO:0003700|GO:0006355
Pvu9g2107 188 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 1 184 - -
Pvu9g2107 188 SMART brlzneu 93 158 IPR004827 GO:0003700|GO:0006355
Pvu9g2107 188 CDD bZIP_plant_GBF1 99 147 IPR045314 GO:0003700|GO:0006355
Pvu9g2107 188 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2107 Pvu-Chr9 30188193 30188759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2107 90 176 bZIP Transcription Factor Family AT5G60830 56.322 1.20e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu9g2107 bZIP_2 5.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2107 - - pvu:PHAVU_009G204300g 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2107 9 30188193 30188759 Pvu3g1876 3 39306174 39306806 PCT