Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2093 ATGACGTTGGGAACTGCTCATGCAAAAGCGCGTTTCATGGGAAGCACTTCTACGTTCTCACACTACAGAAAAAAGATTGCAGTGGCGAACTTATTCCAGAAGTACGGTTTTCCCTCTTCTCTCATCAACACCTTCATCTCGCGCAATCCTTCCCTTCTCCACTCCCCTCTCCCTCAACTCCACCAATCCCTCACCACGCTCTTCTCCCTCCGCATCCCCCAAAACGACGTCGTTTCCCTCCTCACTACCCACCCCTTCCTCATCCACCATTCCTTCCACCAAACCCTTCAATCCCGTCTTCCCCATCTCCAAACGCGCTTCCCCACACTCTCCCATTCCACCCTCGTCAACCTCCTCCTCTCTTCCGCAAAGTTACACCTCGACCCTCTCCAACTCTCCCCCAAACTCCACGCGCTCAAAACCAATTTCGCGTTTTCTGACGCCACCGTGGCCAGCGTCCTGGAAGGGTTCCCCGACGTGGTTGTCACGGGCGAGAACGAAATCGCGAGCGTGATCGATTTTCTCGTGGGGTTCGGAATCCCCCGGGGCGAGATTGATCAAGTTGTCCGTTCGTTTCCTAGGGTTTTGGCGCTCGGTGTTGAGCACAGGCTGAGGCCGTTGTTTCGGGAAATCAAGGAGCTAGGGTTTTCCAATCGCGAGATGAGGGGAGAGATCTCGCGGGACCCGAGGATTCTGGGGATGGAATTGGGAGAATTTACGCGGTGCTTGAGGCTGTTAGAGAGTTTAAGATGCAGGGAAACTATTAAAGAGAGGGTTTTGGGTTCGGGTCTGATGAGAGCGTGTTTTGAAGTGAAGTTAAGAGTGGATTGTTTGTGTGGGTATGGTTTGACTCGAAGGGATGCTCTGAAGATTATTTGGAATGAGCCAAGGGTGATTTGTTACGAGGTTGCGGATATTGAGAGGAAGGTTGAGTTTCTGGTGCAGAGGATGAAGTGTGGTGTGGAGTGTTTGGCAGAGGTGCCTAAATACTTGGGTGTGAATTTTGAGAAGCAGATTGTGAGCAGGTACAGTGTGGTGGAGTGTTTGAGGGGGAAGGGTGCGATTGGGTTTGAGGTTGGGTTGAAGGATTTGGTAATGCCTTCTAGGCTTAGGTTCTATAATCATTATGTGAAGCCATACCCGGAGTGTGAAAAGATCTATGGAAGGTTTTCTGGGTGTGGTGTTCAAGTTAAGACGAAGCATCCCGCTGGACTGTGGAAACTGTTTAAACCGCAGAAGTTTACTGAAAGGGATGAAGATGTGAAGAACGTGAGGTCCTTCATGGAGTCTCTGGTTTAG 1299 0.5073 MTLGTAHAKARFMGSTSTFSHYRKKIAVANLFQKYGFPSSLINTFISRNPSLLHSPLPQLHQSLTTLFSLRIPQNDVVSLLTTHPFLIHHSFHQTLQSRLPHLQTRFPTLSHSTLVNLLLSSAKLHLDPLQLSPKLHALKTNFAFSDATVASVLEGFPDVVVTGENEIASVIDFLVGFGIPRGEIDQVVRSFPRVLALGVEHRLRPLFREIKELGFSNREMRGEISRDPRILGMELGEFTRCLRLLESLRCRETIKERVLGSGLMRACFEVKLRVDCLCGYGLTRRDALKIIWNEPRVICYEVADIERKVEFLVQRMKCGVECLAEVPKYLGVNFEKQIVSRYSVVECLRGKGAIGFEVGLKDLVMPSRLRFYNHYVKPYPECEKIYGRFSGCGVQVKTKHPAGLWKLFKPQKFTERDEDVKNVRSFMESLV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2093 432 Pfam mTERF 112 237 IPR003690 GO:0003690|GO:0006355
Pvu9g2093 432 Pfam mTERF 212 365 IPR003690 GO:0003690|GO:0006355
Pvu9g2093 432 Gene3D Transcription termination factor 3, mitochondrial 162 390 IPR038538 -
Pvu9g2093 432 PANTHER CGI-12 PROTEIN-RELATED 40 430 IPR003690 GO:0003690|GO:0006355
Pvu9g2093 432 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 40 430 - -
Pvu9g2093 432 SMART mt_12 43 73 IPR003690 GO:0003690|GO:0006355
Pvu9g2093 432 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Pvu9g2093 432 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Pvu9g2093 432 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Pvu9g2093 432 SMART mt_12 222 252 IPR003690 GO:0003690|GO:0006355
Pvu9g2093 432 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu9g2093 mTERF 1.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2093 - - gmx:100783135 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2093 9 30029876 30032130 Pvu9g2093 9 30029876 30032130 ECH