Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2087 ATGGCAGCAAAACTCCTGCAATCTTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCAACATGTTCTCACGGCTCGCCGCACTACACAGAAGAGGCTTCCTTCTGGTAATTCGCACTTCAGTGATGGAAGCTTGGAAAGAGATTCGAATAACATACACCATCGCCAAACAACAACTGATACTAGCATAAACAAGGGTGTGAACGAAAGGCAGAGAATTTCAACCGAATCATCAAGAGCATCATTTTCTTCTTGTTCATCATCAGTGTCCTCTTTGGATTGTAAGGCTGAAGCAGATGCACCATTTGACAGGATTCTTTTTCCTGAAACTCCTTCAAGGGATGCAGTCATGAATCAACCAACCATCTCTTCCCATTTTGGATGTAACTCCCTTGACCTGAGGGATGTGGTGAAAGATTCTATGTATAGGGAAGCCCGAGGACTGTCAGTGAAGACTACAGGCAAAGAAGAATCTGCCATTAATGCCATGAAGCACAGGGATTCACCACGTCCTATGCAGTTGCCCAAATTTGTTGATGGATCTTATAGAGTTGGAATAGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCTATCCGAGTCCTTGCTAAACTTAGAGAAGCGCCTTGGTATTATGCAGAAACTAAAGAACTTCCAAGATCATCACATGAAGTAAAAGATGGACCCTGGCATTCGATCTCAAAGGATGCTTCTTGGTTTGCTTATGAAGGTAAAGAAATAAGTCGTTTATCTTTTGAATCACGAGACACCATCAAATCTATGCCAAAACTAAAAGAGCTTCCTAGACTTTCACTGGATAGTAAGGAAGGTTCATTCCGCCCTTATAGTTCTGACTCAGCCACTCACCCGTCAAGAAACGTTTACACTGGCACATCCACATCAAATGACAAATTCCCTACCCTACAACAGCCTTCAACAATCCCCAGTCGTCCACCTGGTGTTGTGGCAAAATTAATGGGCTTAGAAGCGTTACCGGATTCCGCTTTGGCTGGTGACACTCAACATTGTTCAACTGAAACTTACTCAGCACAAGATAATGGTCAGTTTCCAAGATCATCAAAAAAAGGACCCACCAGGCCACTCCGAGTTTCTCATTCTCCAAAAATTTCTTTGAAAGACCCAACTTCCCCACGGCGAAAAAATCCCGACCTAGTTATGAAACCCATCTCAAGTTCAAGGTTTCCCATTGAACCAGCACCATGGAAGCAGCAAGATGGAAATCGAAGCTCCCAGAAACTGAATTTAAGGGGTGTAAAAGCTCCAGCGAGAGCACCAGATTCCTTTCCTTCAGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTCAGAGCATTAAAACAGATACTTGAAGCAATGCAAGAAAAGGGACTATTAGAGAGCAGAAAAGAAGAACAAGCTCCAAATGCTGTTGGAAGTCAAAGTGACTATGAACCAAAAGCTACCAGCCAAGATCAGAATACCGGGTCAGTAAGGCAACAAAATACTCAGAGAAACAATTTTCTATCATCCACGCTCAAGGGATCTGAATCAGCAAGGGCTTTTGAATCCCCAATAGTTATTATGAAACCAGCAAAGCTTGTTGAGAAAACTGCAATTCCTGCTTCTTCAGTCATTCCGATTGGTGGTCTTTCTGTTTCCCATAAACACCAGAATGGTGGTGTGTATGTAGATAATAAAACAAGTACATCTGCTACTCGAGTAGCAAAAGATCAGTCTCCCAGAAACATTCATCGGGATGCTTCTGCCAGTTCCATTGATAAGAAGGCAAATGGTAGTAAGACTACAAGATCTGCACAATCTCAATCTAGGTCTCAACAACATCTAAAAGAAAGTAGCCAAAGTTCAGTGAAGCACTCAGGAACTGTGAGCCCAAGATTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGATCTCGTCCACCTGCTCCACCATCAGATTTCACCAAACATGGAAGGCAATCTGGTAAGAAGGCAGCAGAGTCAGGTTCACCAGGTGGGAAGCAAAGACCCAAAACCCTCAACTCGCGACATAGTGACGAGCAACTCAGTGAGATAAGCAATGAATCAAGAAGTTTATGTTGCCTGGGGGATGAAACTTCTCTGCAATCAGACAGTTTAACTGTCAACTCTAAGATGGAAGTGGAAGTCACAAGTAGTTTGCAGTCTGTTGAAAATGATGACAACCAAAGTCCATCTTTGAAGGCTGTGAAGCAATTGATTTCAGAGACAGTGCAGAAAAAATCAACTCCAAGGTTGAATGAGGATGAGTCAGTTGCAGAACTTGGAACAGATGCCCCGGAACATCCAAGTCCTATCTCAGTTCTTGATGGATCTGTGTACAGAGATGATGTGCCATCCCCAGTAAAGCAGATATCTGAAGATTCAAAAGGTGATGATGCTCAAGAATCCGAAGAAAATGAGATTAAAGATCAGTGGAACCCAGCAGAGAGCCTTTCATTTAACAGCATGGGATCGGGAGAGATCAATCGCAAAAAATTACAGAACATAGATCACCTTGTCCAGAAGCTTCGACGGCTGAACTCCAGTCATGATGAAGCTAGAATTGATTACATTGCTTCGCTATGTGAAAACACAAATCCAGATCATAGATACATTTCTGAAATATTATTAGCTTCGGGCCTCTTACTCAGAGATTTGAGTTCCGAGTTGCTGACATTTCAACTTCACTCCTCAGGTAATCCCATAAATCCTGAGTTATTCCTTGTCTTGGAACAGACCAAGGCAAGTAGTTTGCTTTCAAAAGAAGAAAGCAGCCCCGAAAAAGAGGCTAACTTGAAGTTGAACAAAGAGAAATTTCACAGGAAATTCATCTTTGATTCTGTGAATGAGATTCTTGGTGCCAAATTAGGCTTGTCCCCAGAGCCATGGTTTCTGCCTAACAGTAACAGACTCACTAAGAAAACCTTGAGTGCTCAAAAGCTTCTTAAAGAACTATGCTTCGAGATTGAAAAAATTCAAGCCAAGAAGCCAGAATGCTGCTTAGAAGATGAAGATGATGATCTGAAAAGTATGCTGTGTCAAGATGTTATGCATGGCTCAGAAAGTTGGACAGACTTTCATGGTTATTTACCTGGGGTTGTGTTGGATGTTGAGAGACTTATATTCAAGGACTTGGTAGATGAGGTTGTGATTGGTGAATCATCTGGTTTGCGAGTCAAGCCATCTGTTAGGCGCAGAAAGCTATTTGGAAAGTAG 3303 0.4226 MAAKLLQSLADDNPDLQKQIGCMTGIFQLFDRQHVLTARRTTQKRLPSGNSHFSDGSLERDSNNIHHRQTTTDTSINKGVNERQRISTESSRASFSSCSSSVSSLDCKAEADAPFDRILFPETPSRDAVMNQPTISSHFGCNSLDLRDVVKDSMYREARGLSVKTTGKEESAINAMKHRDSPRPMQLPKFVDGSYRVGIDGKQSVPIDLKESIRVLAKLREAPWYYAETKELPRSSHEVKDGPWHSISKDASWFAYEGKEISRLSFESRDTIKSMPKLKELPRLSLDSKEGSFRPYSSDSATHPSRNVYTGTSTSNDKFPTLQQPSTIPSRPPGVVAKLMGLEALPDSALAGDTQHCSTETYSAQDNGQFPRSSKKGPTRPLRVSHSPKISLKDPTSPRRKNPDLVMKPISSSRFPIEPAPWKQQDGNRSSQKLNLRGVKAPARAPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQAPNAVGSQSDYEPKATSQDQNTGSVRQQNTQRNNFLSSTLKGSESARAFESPIVIMKPAKLVEKTAIPASSVIPIGGLSVSHKHQNGGVYVDNKTSTSATRVAKDQSPRNIHRDASASSIDKKANGSKTTRSAQSQSRSQQHLKESSQSSVKHSGTVSPRLQQKKLELEKRSRPPAPPSDFTKHGRQSGKKAAESGSPGGKQRPKTLNSRHSDEQLSEISNESRSLCCLGDETSLQSDSLTVNSKMEVEVTSSLQSVENDDNQSPSLKAVKQLISETVQKKSTPRLNEDESVAELGTDAPEHPSPISVLDGSVYRDDVPSPVKQISEDSKGDDAQESEENEIKDQWNPAESLSFNSMGSGEINRKKLQNIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGNPINPELFLVLEQTKASSLLSKEESSPEKEANLKLNKEKFHRKFIFDSVNEILGAKLGLSPEPWFLPNSNRLTKKTLSAQKLLKELCFEIEKIQAKKPECCLEDEDDDLKSMLCQDVMHGSESWTDFHGYLPGVVLDVERLIFKDLVDEVVIGESSGLRVKPSVRRRKLFGK* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 777 791 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 574 722 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 496 528 - -
Pvu9g2087 1100 PANTHER LONGIFOLIA PROTEIN 1 1098 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 816 840 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 68 92 - -
Pvu9g2087 1100 Pfam DUF761-associated sequence motif 330 348 IPR032795 -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 291 330 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 581 600 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 289 334 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 361 448 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 658 672 - -
Pvu9g2087 1100 Pfam Domain of unknown function (DUF4378) 897 1077 IPR025486 -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 486 528 - -
Pvu9g2087 1100 PANTHER LONGIFOLIA PROTEIN 1 1098 IPR033334 GO:0051513
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 40 58 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 774 845 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 615 656 - -
Pvu9g2087 1100 MobiDBLite consensus disorder prediction 40 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2087 Pvu-Chr9 29949125 29955156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2087 137 1099 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.769 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2087 - - gmx:100787391 1830.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2087 9 29949125 29955156 Pvu9g2087 9 29949125 29955156 ECH
Pvu3g1897 3 39549116 39554994 Pvu9g2087 9 29949125 29955156 PCT