Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2086 ATGATGATGATGGCGAGTTCAAGAGAAGGTCAACAAGCGAAGCAAGAAGGTGGCCCCATTAATATTGACAAGTTTTCCAAGGCATCTTCCAGTACAAAACAATGGACAGCGTTCAGAAATCCAAGAATTGTGAGAGTGTCACGTTCTTTTGGAGGAAAAGATAGGCACAGCAAGGTTTGCACCATAAGAGGGTTGAGGGACAGAAGGATTAGGCTCTCAGTGCCCACAGCAATTCAGCTATATGATCTTCAAGACAAGCTTGGGCTAAACCAACCAAGCAAAGTCATAGATTGGTTGCTTGAAGCAACTAAACTTGACATTGACAAGCTCCCTCCACTTCAATTTCCTCAGGGCTTTGGTCAATTTCATCATCCACAAACCCTACTCCCCTTTCATGATTCAACTGCCTCTCAGCTTTCTCTCGGACCCTTCGGTGATGCTAGCTCCACATTTGTAAGGGATGGGGGCGTTCAAAACGTCATGGCAAAGTCAAGGTATTGGGAAAGTGTAGATTCAATATCAAGATTAAAAGGCAAGGAAGCTGAAAAGGGCAAGTGGGTCAAAACAAATGAGCAAGAAAATCATGAAGACGATGTTGTTGGAAGCTACAGCAACTTGCATGCATCTACTCAGAGGCTTTTCCCTATGGGTAGTGGTACCACCACTACTCACTCCCTTTTACCTGGTTTGTTAAACAATACCATGCCATATAACCCCTACAATGCCGACCCTTCTAGTTTGTCGTTATCCCAATTTGGAGGCCATGGCTTGTTTCCTTCCCAGCAGGTAGATCCCGGTCCAAGCACTGGAAATGGTGTTCAATTCCCATCTTCTTTGCCATTACCTTCATCGGCTTCTCAATTTTTCTTTGGCTCATCTTCTGCTACACCATCAATGTTCACTACCTATGCTCCATTTCTTACACCCTCAGTAGACAATGATCCTAGACAGTTTAACCACATTCAGTTCCTCAACTCAGGTTCTCAAATCTTGCCTCATCCTCTCATTCCATCTCTTCACTCCTTCAATTCATATGTCAGACCCTTCCCAGCAACACCCTTTAGTTCAAAGCTTTTGGAGTCAGATAGCATCCGCAGTCAACATGATAAGGGTAGCACTTCTTGA 1125 0.4427 MMMMASSREGQQAKQEGGPINIDKFSKASSSTKQWTAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVIDWLLEATKLDIDKLPPLQFPQGFGQFHHPQTLLPFHDSTASQLSLGPFGDASSTFVRDGGVQNVMAKSRYWESVDSISRLKGKEAEKGKWVKTNEQENHEDDVVGSYSNLHASTQRLFPMGSGTTTTHSLLPGLLNNTMPYNPYNADPSSLSLSQFGGHGLFPSQQVDPGPSTGNGVQFPSSLPLPSSASQFFFGSSSATPSMFTTYAPFLTPSVDNDPRQFNHIQFLNSGSQILPHPLIPSLHSFNSYVRPFPATPFSSKLLESDSIRSQHDKGSTS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2086 374 MobiDBLite consensus disorder prediction 1 22 - -
Pvu9g2086 374 PANTHER TRANSCRIPTION FACTOR TCP17 2 369 - -
Pvu9g2086 374 Pfam TCP family transcription factor 52 161 IPR017887 -
Pvu9g2086 374 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Pvu9g2086 374 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 369 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2086 Pvu-Chr9 29911522 29913608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2086 35 310 TCP Transcription Factor Family AT5G60970 44.211 7.10e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu9g2086 TCP 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2086 - - gmx:100788984 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1898 3 39567229 39569207 Pvu9g2086 9 29911522 29913608 PCT