Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2059 ATGAAGGATCCAGAGGAGTACCAAGTGAAGTCTAGAAGGCCTCTTTCGAAACCCACAGAACGTAGAAGAAGGTGCAGGAGGAGGAGCCAGTGCAAGCCAGAGAATTTACAAGAAGCAGAACTTGATCCACAGCTTGCTTCCTCTGCCACTTGCAAGAGTCTTGTGTTTCATCAAAGGCCTGGCTTTGGCCAACTTGGGACTAAGTGTCTCATCAAAGCTAACCACTTCCTTGCAGATATATCAGTATCTGACTTGAGCCATTACAATGTTAAAATAACACCTGAAGTCACTTCACGAAAAACAAGCAAGGCTATCATAGCAGAGTTGGTGAGGGTTCACAGGCACACTGGCTTAGCCACGAGGCTCCCTGTGTATGATGGAGGAAGAAACCTTTACACATCTGGTTTGCTTCCTTTTACACACAAAGAATTCAATGTAACATTGAGTGAGGATGACGATGCCACCAGTGGTACCAGGGCAAGAGAGTTTAAGGTGTTAATCAAGTTTGCAACTCATGTTAGCATGCATCAGCTACGTGACCTTTTAAGTGGAAAGCAAGTGGACAATCCACAGGAAGCTCTAACCGTCTTTGATATTGTGTTAAGGGAGCTTGCGGCTCAGAGTTATGTGTCAATTGGGAGGTTTCTTTATTCTCCGGATGTAAGAAAACCACAGCAGTTGGGTGGTGGCCTTGAATCGTGGAGGGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCACTTAACATTGATATGTCATCAATGGCTTTTATTGAACCACTACCTGTGATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTGCACTCAAAGCCATTATCGGATGCAGATCGTGTCAAGATAAAAAAGGCCTTAAGAGGTGTAAAAGTTGAAGTTACACACAGAGGAAATTTCCGAAGGAAGTATAGAATATCAGGACTGACTTCACAGCCTACAAGGGAGCTTATTTTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTATTTTCAAGAAATGTATGGATTTACTATCAAATATTCTCATCTACCTTGCCTTCAAGTAGGAAGCCAAAGGAAGGTGAACTATTTGCCCATGGAGGCATGCAAAATAGTTGAGGGCCAGAGATATACAAAAGGGCTAAATGAGAAACAGATAACTTCTCTGCTGAAGTTCTCATGCCAGAGACCCCGAGAACAAGAGGCAGACATTTTACAGACAATGCAACAAAACAATTACGACAATAATCCGTATGCAAAAGAGTTTGGCATCAGCATAGACAACAAGCTTGCATCCGTTGAGGCTCGGGTTCTTCCACCTCCTTGGTTGAAATATCACGACACTGGAAGAGAGAAAGAATACTTGCCACAGGTTGGTCAGTGGAACATGATGAACAAGAAAGTAATAAATGGAAGTACTGTAAGATATTGGACATGTATCAATTTCTCTCGAAGTGTACAGGAAGGTACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGTCAGGACCCTGTCATTCCTATATATTCTGCAAGACCAGATCAGGTAAAGAAAGCTTTGAATTATGTGCATTCTGCTGCTATGGATAAGCTCGGAGGGAAAGAGCTAGAGTTACTGATTGTCATTCTTCCAGACAATAATGGCTCTCTGTATGGTGATCTCAAAAGAATTTGTGAAACAGATCTGGGGTTGATTTCTCAATGTTGCCTTACAAAACATGTATTCAAGATCAATAGACAATATCTTGCAAATGTGGCACTAAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTACTTTTGGATGCTTTAAGTTGGAGGATTCCACTGGTTAGTGATATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCAGGAGAGGATTCTTGTCCATCCATTGCTGCGGTTGTTGCCTCCCAGGACTGGCCTGAAGTAACAAAGTATGCAGGGTTGGTTTGTGCTCAGCCTCATCGAGAAGAACTTATTCAAGATCTTTTCAGATCTTGGAAAGATCCACAGAGGGGTGTAACTTATGGTGGTATGATCAGGGAGCTTTTACTATCATTTAAGAAGGCAACAGGACAAAAACCATTGAGAATAATCTTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTACCAGGTTTTGCTATATGAGCTTGATGCCATCCGCAAGGCTTGTGCATCTTTGGAACCTAGTTACCAGCCACCAGTAACATTTGTAGTAGTTCAAAAGCGGCATCACACTAGACTCTTTGCAAACAATCACGATGACAGAAATAGTACTGATAAGAGTGGGAATATCTTACCTGGTACTGTGGTAGATTCTAAGATCTGTCATCCTTCTGAATTTGACTTCTACTTATGCAGTCATGCAGGAATTCAGGGTACAAGTAGACCAGCACACTACCATGTCCTCTGGGACGAGAACAATTTCACTGCAGATGAGATTCAGTCTCTTACCAACAATTTATGCTACACTTATGCAAGATGTACACGGTCTGTTTCTGTAGTGCCTCCAGCATACTATGCTCATCTAGCAGCCTACAGAGCTCGATTCTACATGGAACCTGATGTTGTAGAGATTACTAAACTGCGAGGCACAAGATCGAAAGAGGGGCCAGTTAGGCCACTGCCTGCTCTGAAAGAGAAGGTGAAAAATGTTATGTTTTACTGTTGA 2727 0.4224 MKDPEEYQVKSRRPLSKPTERRRRCRRRSQCKPENLQEAELDPQLASSATCKSLVFHQRPGFGQLGTKCLIKANHFLADISVSDLSHYNVKITPEVTSRKTSKAIIAELVRVHRHTGLATRLPVYDGGRNLYTSGLLPFTHKEFNVTLSEDDDATSGTRAREFKVLIKFATHVSMHQLRDLLSGKQVDNPQEALTVFDIVLRELAAQSYVSIGRFLYSPDVRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGFTIKYSHLPCLQVGSQRKVNYLPMEACKIVEGQRYTKGLNEKQITSLLKFSCQRPREQEADILQTMQQNNYDNNPYAKEFGISIDNKLASVEARVLPPPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWTCINFSRSVQEGTARGFCQQLVQMCQISGMEFSQDPVIPIYSARPDQVKKALNYVHSAAMDKLGGKELELLIVILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFRSWKDPQRGVTYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFANNHDDRNSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVVEITKLRGTRSKEGPVRPLPALKEKVKNVMFYC* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2059 908 CDD Piwi_ago-like 421 871 IPR045246 -
Pvu9g2059 908 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 19 907 - -
Pvu9g2059 908 Pfam Argonaute linker 1 domain 211 260 IPR014811 -
Pvu9g2059 908 MobiDBLite consensus disorder prediction 1 15 - -
Pvu9g2059 908 SUPERFAMILY Ribonuclease H-like 540 873 IPR012337 -
Pvu9g2059 908 SMART DUF1785_2 210 262 IPR014811 -
Pvu9g2059 908 Pfam N-terminal domain of argonaute 68 201 IPR032474 -
Pvu9g2059 908 SMART PAZ_2_a_3 267 399 IPR003100 GO:0005515
Pvu9g2059 908 PANTHER PROTEIN ARGONAUTE 10 19 907 - -
Pvu9g2059 908 Pfam Mid domain of argonaute 460 537 IPR032473 -
Pvu9g2059 908 Gene3D - 620 908 IPR036397 GO:0003676
Pvu9g2059 908 MobiDBLite consensus disorder prediction 1 31 - -
Pvu9g2059 908 CDD PAZ_argonaute_like 262 376 - -
Pvu9g2059 908 ProSiteProfiles Piwi domain profile. 551 872 IPR003165 GO:0003676
Pvu9g2059 908 Gene3D - 441 614 - -
Pvu9g2059 908 SUPERFAMILY PAZ domain 258 418 IPR036085 GO:0005515
Pvu9g2059 908 Pfam Argonaute linker 2 domain 405 449 IPR032472 -
Pvu9g2059 908 SMART Piwi_a_2 551 872 IPR003165 GO:0003676
Pvu9g2059 908 ProSiteProfiles PAZ domain profile. 263 377 IPR003100 GO:0005515
Pvu9g2059 908 Gene3D paz domain 257 381 - -
Pvu9g2059 908 Pfam PAZ domain 267 393 IPR003100 GO:0005515
Pvu9g2059 908 Pfam Piwi domain 552 871 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2059 Pvu-Chr9 29544840 29560158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2059 56 908 Eukaryotic Initiation Factors Gene Family AT5G43810 74.216 0.0 1383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2059 K11593 - gmx:100813485 1712.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2059 9 29544840 29560158 Pvu9g2059 9 29544840 29560158 ECH
Pvu3g1659 3 36714961 36722489 Pvu9g2059 9 29544840 29560158 PCT
Pvu9g2059 9 29544840 29560158 Pvu3g1661 3 36731515 36734214 PCT