Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2052 ATGGACGGAAGGAGAGAGAATATAATCGCTGCTATATCAGTGATTACACTGGTTATCCTCATAGTTATTGCTCGTGTCGCGTTGAAGCTCTCAAAGCCCTTCTTCCTTATTTTTGGTGCCGGTGTTGCTGTCATTCTTGCAGTCTTTGCTTATCTTCTCCTTAGCACAAGGTACAACCGCAGGAGGAGGCTACTGGAGTCACAGTTGAAATCTGAAGGCCAAGAACTTCGCATAGAGTACAGTTTCTTGAAGAAAGTTGCGGGGGTTCCGATTAAGTTCAGATACAAGGAGCTTGAGGAAGCCACTGATGGGTTTCAGGCACTGATTGGAAAAGGTGCTTCTGCTTCAGTTTTCAAAGGTATTCTCGATGATGGCACTTCAGTTGCCGTGAAACGAATCGATGGAGAGGAAAGAGGGGAGAGGGAGTTCAGATCAGAGGTTGCAGCCATAGCTAGTGTGCATCATGTGAACCTTGTGAGGCTATTGGGCTACTGTAATGCTCCAATAGCACCTAGGTACCTTGTTTATGAATATGTCTCAAATGGGTCTTTGGATTGTTGGATTTTTCCCAAAAGATCATCTCAGAGGCGCCGTGGCGGGTGCTTGTCGTGGAACTTGAGGTACACAGTTGCTATTGATGTTGCCAAGGGACTTGCTTATCTTCACCATGATTGCAGGTCGAGGATCTTGCACCTTGACGTAAAGCCAGAAAATATACTGTTGGATGAGAATTACAGAGCACTTGTTTCAGATTTTGGTTTGGCAAAGCTTGTTGGCAAGGATGAAAGCCTAAAATTTGTGTCTGCTATTAGAGGAACAAGAGGGTACTTGGCACCTGAGTGGCTCTTAGAGCAAGGTATTTCCGATAAGACTGACATATATAGTTATGGGATGGTTCTCTTGGAGATTGTTGGAGGCAGGAAAAACGTCTCCTACATGGATGATGAAAAGGCCAAGTCAAAACGAAAATGGCAGTACTTTCCAAAGATTGTGAATGAGAAAGTGAGGGAAGGTAAACTCATGGAAATTGTTGATCATAGGTTGTTGGAAGGTGGGGGTGTTGATGAGAGGCAGGTAAAGACACTGGTTTATGTTGCTTTGTGGTGTGTGCAAGAGAAGCCAAGATCAAGGCCTAGCATGGCCCAAGTTGTTGATATGCTTGAAGGGCGTGTGAGGGTAGAACTGCCACCTGATACCAGAATGGTTCTTGTTGATTTTCTGGGTGTGGATGATAGTGCAACAGATAGCAGTAGCAAGCCAAGGGTGGGCTTTGTGTCGAATCAAAGAGCACAAAGCGATGTAGAGTGTTCATCAACCTACTCTCTTGCTACCACTGTTATGTCCGGAAGATAA 1353 0.4501 MDGRRENIIAAISVITLVILIVIARVALKLSKPFFLIFGAGVAVILAVFAYLLLSTRYNRRRRLLESQLKSEGQELRIEYSFLKKVAGVPIKFRYKELEEATDGFQALIGKGASASVFKGILDDGTSVAVKRIDGEERGEREFRSEVAAIASVHHVNLVRLLGYCNAPIAPRYLVYEYVSNGSLDCWIFPKRSSQRRRGGCLSWNLRYTVAIDVAKGLAYLHHDCRSRILHLDVKPENILLDENYRALVSDFGLAKLVGKDESLKFVSAIRGTRGYLAPEWLLEQGISDKTDIYSYGMVLLEIVGGRKNVSYMDDEKAKSKRKWQYFPKIVNEKVREGKLMEIVDHRLLEGGGVDERQVKTLVYVALWCVQEKPRSRPSMAQVVDMLEGRVRVELPPDTRMVLVDFLGVDDSATDSSSKPRVGFVSNQRAQSDVECSSTYSLATTVMSGR* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2052 450 PANTHER RECEPTOR-LIKE KINASE 1 450 - -
Pvu9g2052 450 Gene3D Phosphorylase Kinase; domain 1 66 178 - -
Pvu9g2052 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Pvu9g2052 450 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 450 - -
Pvu9g2052 450 SUPERFAMILY Protein kinase-like (PK-like) 85 388 IPR011009 -
Pvu9g2052 450 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Pvu9g2052 450 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Pvu9g2052 450 ProSiteProfiles Protein kinase domain profile. 103 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2052 450 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2052 450 Pfam Protein kinase domain 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2052 Pvu-Chr9 29391580 29393190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2052 1 399 Receptor kinase-like Gene Family AT5G20050 63.930 1.18e-177 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu9g2052 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2052 - - vra:106757544 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1674 3 36978378 36980106 Pvu9g2052 9 29391580 29393190 PCT