Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2049 ATGTCTTCCATGGCATCCACGACCCGAGACGAATCCTCCGACAACGACAGCAACTGCTCCTCGGTAACCGCACCGGACTCCTCTCGCACCTGGCTCACCACCTTTAGCTTCCGCCGCTCCAACCGCAGCTCCTTCTCCCTCTCCACCGCCCAGACCACCTCAAGTGCTGCATGCGAGGCCATGCGCCGCCTCCGCCTCCAAACCGGCGCCATCGGCCTCGACCACTTCCGCCTTCTGCGGCGGCTCGGCAGCGGCGACATCGGGAACGTGTACCTCTGCCAGATACGGAACCCGGCGGTGGGGTTGGCGCAGTGCCTCTACGCCATGAAGGTGGTGGATAGAGAGGCGCTGAGCATACGGAAGAAGCTACACCGAGCGGAGATGGAGAAGGAGATTCTGGCCATGATGGATCACCCCTTCTTGCCTACCCTATACGCTGCGTTTGATGCCTCTCATTACTCTTGCTTCGTCATGGACTTTTGCCCCGGCGGAGACTTGTTCTCCGCTCGCCAACGCCTCCCCGGAAAACGCTTTACCATCTCATCCACTAAGTTTTATGCAGCAGAGACACTTGTGGCACTAGAGTATCTCCACATGAAGGGCATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTGGTAAGGGAAGACGGTCACATTATGCTTTCGGATTTTGATCTGTGTCTGAGATGCGATGTCGTTCCAAAGCTTTTGAGAAGCAAAACCAGATCAGAACGCAGCATCAAGACACGAGCATCTTCTTGCGCTGCCCCCATGCAATCCTGTTTCTCTGCCTCAAGCAAGAGAAAGAAGGTGACAACAGTTATAAGGGAAAATGTGGAGGTGTGTGAACTTGACACAGAGGTGGTGGCAGAGCCCATCAATGCAAGGTCCAAGTCATTTGTGGGAACCCATGAGTACTTGGCACCAGAAGTGATTTCTGGTCAAGGACATGGTAGTGCAGTGGATTGGTGGACTTTTGGAGTTTTCTTGTATGAAATGCTATATGGGAGAACACCCTTCAAAGGTGAGAACAATGAGAAAACACTCACCAACATTCTCAAGCAGCCCTTGTGTTTCCCTAGAATTGCAGTGAGTAGCAGCAAGGAGTATGAAGAGATGGTGAAGGTTCAAGACCTCATCAGCAAGCTCTTGGTGAAGAACCCAAAGAAGAGAATTGGGTGCTGCATGGGGTCAGTTGAGATCAAGAGGCATGAGTTCTTCAAGGGAGTGAACTGGGCTCTAATTAGATCAGTTAGGCCACCTGAGTTCCCTGCTGATTTGAACAAGATTAGGAGTAGAGTTTTGTTACAGAAACTAAGCAAGAAAGACAAGGATCAACCGTTTCAGATTACTCATCATTTTGACTACTTCTGA 1377 0.5142 MSSMASTTRDESSDNDSNCSSVTAPDSSRTWLTTFSFRRSNRSSFSLSTAQTTSSAACEAMRRLRLQTGAIGLDHFRLLRRLGSGDIGNVYLCQIRNPAVGLAQCLYAMKVVDREALSIRKKLHRAEMEKEILAMMDHPFLPTLYAAFDASHYSCFVMDFCPGGDLFSARQRLPGKRFTISSTKFYAAETLVALEYLHMKGIVYRDLKPENVLVREDGHIMLSDFDLCLRCDVVPKLLRSKTRSERSIKTRASSCAAPMQSCFSASSKRKKVTTVIRENVEVCELDTEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLTNILKQPLCFPRIAVSSSKEYEEMVKVQDLISKLLVKNPKKRIGCCMGSVEIKRHEFFKGVNWALIRSVRPPEFPADLNKIRSRVLLQKLSKKDKDQPFQITHHFDYF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2049 458 PANTHER PROTEIN KINASE PINOID 2 4 458 - -
Pvu9g2049 458 Gene3D Transferase(Phosphotransferase) domain 1 161 229 - -
Pvu9g2049 458 PANTHER FLIPPASE KINASE 1-RELATED 4 458 - -
Pvu9g2049 458 CDD STKc_phototropin_like 74 426 - -
Pvu9g2049 458 ProSiteProfiles Protein kinase domain profile. 76 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2049 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pvu9g2049 458 Gene3D Phosphorylase Kinase; domain 1 74 160 - -
Pvu9g2049 458 SUPERFAMILY Protein kinase-like (PK-like) 58 428 IPR011009 -
Pvu9g2049 458 Gene3D Transferase(Phosphotransferase) domain 1 295 422 - -
Pvu9g2049 458 MobiDBLite consensus disorder prediction 1 26 - -
Pvu9g2049 458 Pfam Protein kinase domain 298 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2049 458 Pfam Protein kinase domain 77 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2049 458 SMART serkin_6 76 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2049 Pvu-Chr9 29363879 29365602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2049 14 458 AGC Kinase Gene Family AT2G26700 54.615 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu9g2049 Pkinase 2.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2049 K08286 - gmx:100787216 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2049 9 29363879 29365602 Pvu9g2049 9 29363879 29365602 ECH
Pvu3g1680 3 37023966 37026042 Pvu9g2049 9 29363879 29365602 PCT