Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2038 ATGGAAGGGAACAAGGACGATGCGTTGAAATGTTTGAGAATCGGCAAAGAGGCGTTAGAAAGTGGCGATCGTACACGCGCGTTGAAGTTCGTGATGAAGGCGCGCCGCCTCGATCCCGCGCTCCCCGTCGACGATCTATTGTCCCGGATAGAGGCGGACACAGGGGATCAGGCCCCTGCCGCGGAGGCAGCGGCGGAACCTACCGTTTCCCCCGATAAGCCTTCTCTACGGCGAAGGGCCGCTACCTCGGCGGCCCCGGCGGGGTCCTCCTCCTCCTCGTCCTCTTCGGTCTCATATACCGAAGAGCAAGTTTCAATTATCAGAGAAATTAAGAGGAAGAAAAACTTTTATGAGATATTGGGATTAGAGAAAAGTTGCACTGTTGAGGATGTGAGGAAATCTTATAGAAAACTGTCCCTTAAGGTTCATCCCGACAAGAACAAAGCCCCTGGCGCTGAGGAAGCATTCAAGGCTGTGTCAAAGGCGTTTCAGTGCCTTAGCAATGAAGATAGTAGGAGGAAGTATGATGTTTCCGGTGAAGATGAATCGGTTTACGAGCAGCGTGCCGCTAGGCCAGCTGCAAGGGGTTTTAATGGTTACTATGAGGCTGATGTTGATGCTGAGGAGATATTTAGGAACTTCTTCTTTGGAGGAATGGCCCCTGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGGTGGTTTCAATGGCTTCAATGGTCATAGGCCTGCAGAACACGCTTCTGGTGGTTTTAATGTGCGTGCTTTAATTCAGTTGCTGCCGGTGCTACTGATTTTGCTACTAAACTTTTTGCCTTCCTCTGATCCCTTGTACTCGCTGTCGAAGAGCTATCCTTATGAGTATCGGCTTACTACACCTAAGGGTGTTAACTATTATGTCAAGTCTGCAAAGTTTGTTCAGGAGTATCCGCCGGAGAGCGAAGAACGAGCAACTCTTGAAGAAAGGGTGGAGAGGGAGTACTTTAGCGTTCTTCGCCAGAATTGTCATTTCGAGTTGCAGCGCCGCCAATGGGGGTATATCCGGGAAACACCGCACTGCGATATGCTGCGGAAGTATGAGTTGGTGAATTGA 1092 0.5009 MEGNKDDALKCLRIGKEALESGDRTRALKFVMKARRLDPALPVDDLLSRIEADTGDQAPAAEAAAEPTVSPDKPSLRRRAATSAAPAGSSSSSSSSVSYTEEQVSIIREIKRKKNFYEILGLEKSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEDSRRKYDVSGEDESVYEQRAARPAARGFNGYYEADVDAEEIFRNFFFGGMAPAANFGGFSFGPGGFNGFNGHRPAEHASGGFNVRALIQLLPVLLILLLNFLPSSDPLYSLSKSYPYEYRLTTPKGVNYYVKSAKFVQEYPPESEERATLEERVEREYFSVLRQNCHFELQRRQWGYIRETPHCDMLRKYELVN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2038 363 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Pvu9g2038 363 Pfam Domain of unknown function (DUF1977) 272 343 IPR015399 -
Pvu9g2038 363 PANTHER - 1 360 - -
Pvu9g2038 363 Pfam DnaJ domain 115 176 IPR001623 -
Pvu9g2038 363 SUPERFAMILY Chaperone J-domain 111 231 IPR036869 -
Pvu9g2038 363 CDD DnaJ 115 168 IPR001623 -
Pvu9g2038 363 SMART dnaj_3 114 171 IPR001623 -
Pvu9g2038 363 MobiDBLite consensus disorder prediction 84 98 - -
Pvu9g2038 363 MobiDBLite consensus disorder prediction 52 98 - -
Pvu9g2038 363 PRINTS DnaJ domain signature 117 135 IPR001623 -
Pvu9g2038 363 PRINTS DnaJ domain signature 135 150 IPR001623 -
Pvu9g2038 363 PRINTS DnaJ domain signature 151 171 IPR001623 -
Pvu9g2038 363 ProSiteProfiles dnaJ domain profile. 115 179 IPR001623 -
Pvu9g2038 363 PANTHER AT29763P-RELATED 1 360 - -
Pvu9g2038 363 Gene3D DnaJ domain 111 225 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2038 Pvu-Chr9 29212265 29213943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2038 110 176 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.845 1.52e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2038 K09518 - gmx:100788812 553.518