Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2016 ATGGAAGAGGAAGAAGCGACGCAGCAACGCCTCACCGACTCCTCCCTAACCACCCATTCACTCACTTCCACTGCTTCCGATGAAGAGCTACTCCACTCGGAAACCCTACTTCTGCATTCTTCTGACCTTCCGCACCACAACGCTGCTCATATGCAAAGAAGCTCTACCGCACGTGAGATTGGCCTAGATGAGAGTAAGGAGTCAGCTCAGCATTCTGATGAGGAAACTATTGTAAAGGAGACAGTTGAGGCACCTCAAAAACAGACAGAAAATCAACTTCAGATGTCTGTTTGTTCAACTTCATTATCTAAACTATCACCAACTTCTGTATCACAGTATTTATCATCTGCCCCTGGTCCAATTGTACCAGAACAGAGACCATCTCCTCCTAAGGCTAATAATGTAAAAGTGGCAAAAGTGGACAAAGGAAGTCCTTCTGGTGGTACAACCTTATCTTCTGTTTCTGTTACGAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGTTATTACAGATGTACCCATTCAAATTGTTGTGCTAAGAAGATTAAATTCTGTGACCATTCAGGACATGTGATAGAGATTGTTTACAAAAGTCAACATAGTCATGATCCCCCACACAAAATTGATTCCACTAAGGAATGTAAATTCCTGCCTTACAGTGAACCTAAAATGAAATGCAGTGTTCCAAAGCAGTCTAGCAGAGTTCGGAATGATTCTGATCCATCATCTTCTCCAAAAGAACCTTTATATGAATCACCTTGCAGTGCTAAAAGGAATCTAGAAAACTCATCTAATGGTGAGAAGGGTAAAGTTTTTTTGAAGGAAGCGCATGTCAATGACCCCGAGCCAAAAAAAAGATTGAACAAAGGTGATGATTTAACATGCTTGGATTCAGCAATAAAACCTGGAAAGAAACCAAAGTTTGTTGTACATGCAGCAGAGGATATGGGGATATCAAGTGATGGATACCGATGGCGCAAATATGGACAAAAATTGGTGAAGGGAAGTCCTCATTTCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAACACAAAAGCTCTCATTATAACATACAAGGGAGTGCATGATCATGACATGCCTGTGCCCAAAAAACGACATGGTCCACCAAGTGCTTCCCTTGTGGCTGCAGCAGCTCCTGCTTCAATGAACAATTTGCAGCTCAAAAGAACTGGTTTGATACAAAACCAGGAAATTTCTGCTCAATGCTCAGAGGACACAGAAGGAGAATTAACCGGGGAAGCATTGGACCTTGAGGGTGAGAAAGCAATCGAGTCAGCTCGAACTCTTCTAAGTATAGGCTTTGAAATTAAACCTTGTTGA 1422 0.4283 MEEEEATQQRLTDSSLTTHSLTSTASDEELLHSETLLLHSSDLPHHNAAHMQRSSTAREIGLDESKESAQHSDEETIVKETVEAPQKQTENQLQMSVCSTSLSKLSPTSVSQYLSSAPGPIVPEQRPSPPKANNVKVAKVDKGSPSGGTTLSSVSVTRASASDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIDSTKECKFLPYSEPKMKCSVPKQSSRVRNDSDPSSSPKEPLYESPCSAKRNLENSSNGEKGKVFLKEAHVNDPEPKKRLNKGDDLTCLDSAIKPGKKPKFVVHAAEDMGISSDGYRWRKYGQKLVKGSPHFRNYYRCTSAGCPVRKHIETAVDNTKALIITYKGVHDHDMPVPKKRHGPPSASLVAAAAPASMNNLQLKRTGLIQNQEISAQCSEDTEGELTGEALDLEGEKAIESARTLLSIGFEIKPC* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2016 473 ProSiteProfiles WRKY domain profile. 329 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 Gene3D WRKY domain 148 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 Gene3D WRKY domain 319 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 ProSiteProfiles WRKY domain profile. 156 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 471 IPR044810 GO:0003700
Pvu9g2016 473 MobiDBLite consensus disorder prediction 57 76 - -
Pvu9g2016 473 MobiDBLite consensus disorder prediction 241 264 - -
Pvu9g2016 473 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 6 471 - -
Pvu9g2016 473 SUPERFAMILY WRKY DNA-binding domain 157 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 Pfam WRKY DNA -binding domain 336 391 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 Pfam WRKY DNA -binding domain 163 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 MobiDBLite consensus disorder prediction 10 30 - -
Pvu9g2016 473 SMART WRKY_cls 161 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 SMART WRKY_cls 334 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 SUPERFAMILY WRKY DNA-binding domain 329 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g2016 473 MobiDBLite consensus disorder prediction 1 76 - -
Pvu9g2016 473 MobiDBLite consensus disorder prediction 240 283 - -
Pvu9g2016 473 MobiDBLite consensus disorder prediction 119 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2016 Pvu-Chr9 28905568 28913126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2016 23 473 WRKY Transcription Factor Family AT4G30935 48.723 2.42e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g2016 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2016 - - gmx:100127388 709.138