Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1966 ATGGAAATGGGTCGTGCAGTGTTGATGCTGTTGTTTTTTTCCACCATTGTTTTATACCCTTCTTCTCTTGCACTCCCGCAAGATGGACATACATTGCTGGAGATCAAAAGCACTTTGAATGACACAAGGAATTTTCTGAGCAACTGGAGAAAGTCTGATGAGTCTCACTGTACATGGACTGGTATCACTTGTCATCCCGGGGAACAACGAGTTCGCTCAATAAATCTACCTTATATGCAACTGGGGGGTATTATATCTCCCAGCATTGGCAAACTCAGTAGACTGCATAGACTGGCCCTTCATCAGAATGGTTTACATGGAGTTATTCCTAACGAAATTGGCAATTGTACAGAGCTTAGAGCACTGTACTTGAGAGCTAATTATTTACAAGGAGGCATCCCATCAGATATTGGAAATCTTTCTTATTTACATGTATTGGATTTATCAAGTAACTCATTAAAGGGTGCTATACCATCTTCTATTGGCCGTCTTACACAATTGCGACTTCTGAACTTGTCAACTAATTTCTTTTCCGGTGAAATCCCTGACGTTGGAGTACTAAGCACCTTCGGGAACAATGCGTTTATTGGAAACTTAGATCTTTGTGGGCAGCAAGTTCAGAAACCTTGTCGGACATCACTTGGGTTCCCAGTGGTGCTACCACATGCAGAAAGTGATGAAGCTGCAGTTCCTGCCAGAAGATCTTCACATTATGTCAAGTGGCTGTTAGTTGGTGCAATAACAATAATGGGGCTTGTACTTGTTATAACTCTTTCGTCACTATGGATTTGCTTGCTATCAAAGAAGGAAAGAGCTGCTAGAAGATACATAGAAGTTAAGGATCAACTCAACCCAGAATCAAGTAGGAAGGATGATGGTGCCAAACTTATCACCTTCCATGGTGATCTGCCATACACATCATTTGAGATCATAGAGAAGTTGGAGTCTCTCGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGTACCGTATACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGAGGATTGATAGAAGCCGGGAAGGTTCTGATCAGGGCTTTGAGAGGGAACTAGAGATATTGGGCAGCATCAAGCACATAAATCTAGTTAACCTGCGTGGTTACTGCAGACTTCCTTCTACTAAGCTTCTAATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAACACTGAACAATCACTGAATTGGAGTACTCGCCTTAAGATAGCGCTTGGTTCTGCCCGGGGCTTGGCTTACTTGCATCACGACTGCTCCCCGAAAATTGTGCACCGCGACATAAAATCCAGCAACATCCTTCTTGATGAGAACATGGACCCTCGTGTCTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCTCATGTTACAACAGTGGTTGCTGGCACCTTTGGTTATCTGGCACCAGAGTATCTACAAAGTGGAAGAGCCACTGAGAAGTCAGATGTGTATAGTTTTGGAGTTCTATTGCTAGAACTTGTAACTGGAAAGAGACCTACAGATCCTACATTTGCAAGCAGAGGTGTAAATGTTGTTGGTTGGATGAACGCGTTCCTGAAAGAAAATAGATTGGAGGAGGTAGTAGACAAAAGATGCAGTGATGCAGATTCAGAATCTGTGGAAGTAATTCTTGAAATGGCAGCAAGTTGCACTGATGCAAATGCTGATGAACGTCCAACAATGAACCAAGTGTTACAGATACTAGAACAAGAGGTTATGTCTCCTTGCCCAAGTGACTTTTATGAGTCACACTCAGATCACTGA 1815 0.4248 MEMGRAVLMLLFFSTIVLYPSSLALPQDGHTLLEIKSTLNDTRNFLSNWRKSDESHCTWTGITCHPGEQRVRSINLPYMQLGGIISPSIGKLSRLHRLALHQNGLHGVIPNEIGNCTELRALYLRANYLQGGIPSDIGNLSYLHVLDLSSNSLKGAIPSSIGRLTQLRLLNLSTNFFSGEIPDVGVLSTFGNNAFIGNLDLCGQQVQKPCRTSLGFPVVLPHAESDEAAVPARRSSHYVKWLLVGAITIMGLVLVITLSSLWICLLSKKERAARRYIEVKDQLNPESSRKDDGAKLITFHGDLPYTSFEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHENTEQSLNWSTRLKIALGSARGLAYLHHDCSPKIVHRDIKSSNILLDENMDPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFASRGVNVVGWMNAFLKENRLEEVVDKRCSDADSESVEVILEMAASCTDANADERPTMNQVLQILEQEVMSPCPSDFYESHSDH* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1966 604 PANTHER RECEPTOR-LIKE PROTEIN 55 8 604 - -
Pvu9g1966 604 Pfam Protein kinase domain 320 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1966 604 PANTHER LRR RECEPTOR-LIKE KINASE 8 604 - -
Pvu9g1966 604 Gene3D Transferase(Phosphotransferase) domain 1 393 594 - -
Pvu9g1966 604 ProSiteProfiles Protein kinase domain profile. 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1966 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Pvu9g1966 604 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Pvu9g1966 604 Gene3D Ribonuclease Inhibitor 26 212 IPR032675 -
Pvu9g1966 604 Gene3D Phosphorylase Kinase; domain 1 282 392 - -
Pvu9g1966 604 SUPERFAMILY L domain-like 25 208 - -
Pvu9g1966 604 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pvu9g1966 604 SMART serkin_6 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1966 604 SUPERFAMILY Protein kinase-like (PK-like) 297 586 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1966 Pvu-Chr9 28205313 28209618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1966 24 594 Receptor kinase-like Gene Family AT2G35620 50.438 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pvu9g1966 Pkinase 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1966 - - gmx:100805042 1121.69