Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1959 ATGGAGTTTGGTTCAGAAAGATCTGCTCAAGAAGTCAAGGAAGAGAAGAGAACTGAATCCACTCTTGGAGGTCAAGAACATCGTCGTCAACAAGAGATTGTTATGCAGGAAGCATCCCTAGCAACTCCAGAAAGATCCTTGGTTGAGGTTGGACCAAACGTTTCTTGCTTATCCAAAAAAGAAGAGGTTGATGAACTTCAAAATGCAAAAGCCGAAATGGGTGAAGTTATAGAGGAAAATCAAAGATTAAAGATGCGTTTGAACCGAATACTTAATGATTACCGAACACTGCAAATGCAATTCCACAGTATAACTGAACAGGAGACAAAAGATTGTTCTGATAAACCGAAGAATGATGAAGAAATGAGGGAGGAATCAGAACTAGTTTCCCTGAGTCTTGGAAGAATTCCAATTCCAAGAAACAACGAGAAAGGTAAAGTCCCTAAAACATTGGAAGAGGAAGAAGATGAAGAAGGGTTGTCCCTGGGATTGGAGTGCAAATATGAAACATCAAAATCTGGAAGCACAACTGAACACGTGCCAAATCCAAGCCCTACCAATAGTGTTGAAGAAGTGCCAAAGGAAGAAGCTGCTGGAGAGAGTTGGCCAGCAAGCAAGGGACACAAGACAAACAGAGATGTTGGAGAGGTTGAGGTTCCCGAACAAAATCCTGCAAAGAAGGCAAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTTTGAACGATGGATGTCAATGGAGGAAATATGGACAGAAGATTTCAAAGGGAAATCCTTGTCCTCGAGCTTACTATCGTTGCACAGTTGCACCATCATGCCCAGTAAGAAAGCAGGTGCAAAGATGTGCTCAAGACATGACCATATTAATCACCACCTACGAAGGAACCCACAACCACCCTCTTCCTCTTTCAGCAACAGCCATGGCTTCCACCACTTCAGCAGCTGCTTCAATGCTATTGTCTGGATCATCAACATCACACTCTGGATCAAGTCCTTCCCCAAACATCACCACCACTGCTGCAGATCTTCATGGAATCAAATTTTCCCTATCAGATGGTTCACAATCAAAGCAATACTACCTTTCCCATCCTGCACTCTCATCTTCAAATTCACACCCCACCATCACTCTCGACCTCACTTCCAATCCATTGTCCTCTTCAGCCCCTTTTGCCAAATTCACTTCAAATTCAAACTACAACCCTCAAAGGTACCCTCCTTCCACCAGCCTAAGCTTCAGTTCCTCCGAATCTAATACAAGTTCTTGGAGCAACGGCTTCTTCACCTACAACACTCAACCATATAATAACAACAGGAATGCGAATGTGAATATCCTTGGTAACATAAACCTTGGAAGACAACAACCGGAACAACAACCGATGGAGAACATCTACAGTTCCTTCATGCAAAGGAACAACAATATAATCCCTCCAGCACAACATTCTCTGCCAGACACCATAGCTGCAGCAACAAAAGTAATCACAGCAGACCCTAATTTTCAGTCAGCTTTGGCAGCAGCACTTTCTTCAATTATTGGCTCAGGAAGCAGTCAGGGAAACCAAGGTGCTGCAGAAAATCCGAGTCAGAAAATAAAATGGGGTGAATTGTTTCCACCATCTTTTGCCTTACCTTCATCTTCAAAAGTCAATGGATGTGCTTCAAGCTTCTTGAACAAATCACCAGCTAATCCACAACAAGGAAGTTTGATGTTTCTTCAGCCACCTTTGCCACTTTCTAGCCCCAAAAGCGCTTCTGGGTCTCCCGGAGATCACAGAGAAAAGAAAAATTAG 1788 0.4329 MEFGSERSAQEVKEEKRTESTLGGQEHRRQQEIVMQEASLATPERSLVEVGPNVSCLSKKEEVDELQNAKAEMGEVIEENQRLKMRLNRILNDYRTLQMQFHSITEQETKDCSDKPKNDEEMREESELVSLSLGRIPIPRNNEKGKVPKTLEEEEDEEGLSLGLECKYETSKSGSTTEHVPNPSPTNSVEEVPKEEAAGESWPASKGHKTNRDVGEVEVPEQNPAKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMTILITTYEGTHNHPLPLSATAMASTTSAAASMLLSGSSTSHSGSSPSPNITTTAADLHGIKFSLSDGSQSKQYYLSHPALSSSNSHPTITLDLTSNPLSSSAPFAKFTSNSNYNPQRYPPSTSLSFSSSESNTSSWSNGFFTYNTQPYNNNRNANVNILGNINLGRQQPEQQPMENIYSSFMQRNNNIIPPAQHSLPDTIAAATKVITADPNFQSALAAALSSIIGSGSSQGNQGAAENPSQKIKWGELFPPSFALPSSSKVNGCASSFLNKSPANPQQGSLMFLQPPLPLSSPKSASGSPGDHREKKN* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1959 595 MobiDBLite consensus disorder prediction 553 595 - -
Pvu9g1959 595 MobiDBLite consensus disorder prediction 1 30 - -
Pvu9g1959 595 Coils Coil 59 100 - -
Pvu9g1959 595 MobiDBLite consensus disorder prediction 553 585 - -
Pvu9g1959 595 MobiDBLite consensus disorder prediction 137 215 - -
Pvu9g1959 595 MobiDBLite consensus disorder prediction 168 189 - -
Pvu9g1959 595 SUPERFAMILY WRKY DNA-binding domain 234 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g1959 595 Gene3D WRKY domain 226 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g1959 595 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 12 591 - -
Pvu9g1959 595 SMART WRKY_cls 241 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g1959 595 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 591 IPR044810 GO:0003700
Pvu9g1959 595 ProSiteProfiles WRKY domain profile. 236 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g1959 595 Pfam WRKY DNA -binding domain 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1959 Pvu-Chr9 28139133 28142787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1959 65 529 WRKY Transcription Factor Family AT1G18860 41.473 2.88e-81 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g1959 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1959 - - vun:114162352 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1984 3 40445375 40449886 Pvu9g1959 9 28139133 28142787 ECH
Pvu8g0437 8 3709079 3711997 Pvu9g1959 9 28139133 28142787 ECH
Pvu2g0925 2 14907240 14909229 Pvu9g1959 9 28139133 28142787 ECH
Pvu9g1959 9 28139133 28142787 Pvu9g1959 9 28139133 28142787 ECH