Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1957 ATGGGGAAATCACCAGGAAAATGGATCAAAACTGTACTATTTGGGAAAAAGTCATCCAGATCAAATATGTCAAAGGGAAGAGAGATTGTTAATAAAAGAGAGGCAGTGGTTGCTTCCAACGTGTTGGAAAATGGTTTGGCCTTAGATCCAAACCACAATGAGATTGCTACAAATGAGGAGGACCTTGTACTGGAGAATGAAGAATCAGAAGTTATTTTACCTGAGAATCAAGAAAGAGACAGTATAGGACCTGTTGATCCAGATGCACCACCTGATCCAGAGAAAATCAGGCAGGAGGTAGCAGCAATAAAGGCACAAGCTGCTTTCAGGGGTTACTTGGCTCGCAGGGCATTTAGGGCTCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACCTAGTTAGGAGACAAGCTGTTGTTACATTATGCTGTATGTATGGGATTGTAAAGTTTCAAGCATTTGCACGTGGACTAAAGATTAGGAAGTCTAATGTTGGATTTGAAATTCATCAGAAGTGCAGTCTATTTAAGCCTCTGGAGGGCAAACTTGGTGAGCCAGTTGGTATTTCCACAAAAATTTCAAAGTTGTCTGCAAATACTTTCATCCGCAAGCTTCAGGCTTCATCAATTACAATAATGGCACTGCGCTTGCAATATGTTAGTGGAGATCCAAATTCAGTGTTAAGCTGGTTGGAGCGCTGGTCAGCATCTTACTTTTGGAAACCAGTTCCCCAACCTAAGAAAATTCGAGACTATAAATCTCAGAGAAAGCAGGGTAATATTTCAAATGGAGAAGTTCAAATTTCCAAGTCAAGACGCACTAACCGGAAGCTTCCTGTCGCAAGTTTTGATCCAGTTCCAGTGCAAACAAATCCTGAATTTGAGAAACCAAAACGTAATTTCAGGAAAACACCATACCAAGTGTCAGATCAAGACCAAGACAATCCACAAAGTGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGATTAATAACCCTGTTGTCGAGAATGCTGTTCAGCCAGAAGTTGAATCTGAGACTCTAAAGCAGCATCTGGAAATCACAACAGTTCTTCCAGGTCATGCTTGTTCAGAACAAGTGATCATTACTTCTGAGGAAAAGATCAAGAAGGAAGATACTTTGACTGTCTCCAATGTGCCTGATGTCGAATTTACACCAAGACCATCAGTTAACAAGGAAGTCTCTGACATTCCAAACAGTTATCTAGTGTCTGTAGAATCTAAACCCTTGTCAGAGACCACAACTAAAGATAGAAACACTTCTCGTGATGAAGTTAAAAACGAGCTAGGCAATCAACCAGAGGATATTTTTAAAGAAGACAACTCCTTATTAACAAATGGAGATTTGAGTCATAAAGATCTGACAGGTAATGAAAACCAGAAACCTACCCGTAAAGCATCAAATGTGATCAAACAGGAGAATGGAGAACATGGCTTAAAGATTAGTCCAAAAGTACCAAGTTATATGGCAGCAACTGAATCCGCCAAGGCAAAGTTGAGGGCACTAGGGTCCCCAAGGTTTGGAGAAGATGGAATTGAGAAAAGCAACACTGCTGATTCTGGGAGACATTCTCTGCCAGCTTCAACTGGCAACAAGATTAGTTCAAATTCACCTAGGACACAGAGATCAGCTCAAGCAGGTGGCAAAGGGAGTAACAAAAGTGACAGATCAATAACATCTTCTAAAGGAGGGAATGGGAAAGTAATTCAAGCAGAGTGGAAGAGGTGA 1755 0.4085 MGKSPGKWIKTVLFGKKSSRSNMSKGREIVNKREAVVASNVLENGLALDPNHNEIATNEEDLVLENEESEVILPENQERDSIGPVDPDAPPDPEKIRQEVAAIKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKFQAFARGLKIRKSNVGFEIHQKCSLFKPLEGKLGEPVGISTKISKLSANTFIRKLQASSITIMALRLQYVSGDPNSVLSWLERWSASYFWKPVPQPKKIRDYKSQRKQGNISNGEVQISKSRRTNRKLPVASFDPVPVQTNPEFEKPKRNFRKTPYQVSDQDQDNPQSELEKVKRNLRKINNPVVENAVQPEVESETLKQHLEITTVLPGHACSEQVIITSEEKIKKEDTLTVSNVPDVEFTPRPSVNKEVSDIPNSYLVSVESKPLSETTTKDRNTSRDEVKNELGNQPEDIFKEDNSLLTNGDLSHKDLTGNENQKPTRKASNVIKQENGEHGLKISPKVPSYMAATESAKAKLRALGSPRFGEDGIEKSNTADSGRHSLPASTGNKISSNSPRTQRSAQAGGKGSNKSDRSITSSKGGNGKVIQAEWKR* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1957 584 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
Pvu9g1957 584 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Pvu9g1957 584 Pfam Protein of unknown function (DUF4005) 481 563 IPR025064 -
Pvu9g1957 584 SMART iq_5 97 119 IPR000048 GO:0005515
Pvu9g1957 584 SMART iq_5 120 141 IPR000048 GO:0005515
Pvu9g1957 584 PANTHER PROTEIN IQ-DOMAIN 31 1 571 - -
Pvu9g1957 584 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Pvu9g1957 584 MobiDBLite consensus disorder prediction 252 320 - -
Pvu9g1957 584 MobiDBLite consensus disorder prediction 258 278 - -
Pvu9g1957 584 Gene3D - 94 144 - -
Pvu9g1957 584 MobiDBLite consensus disorder prediction 510 584 - -
Pvu9g1957 584 PANTHER IQ-DOMAIN 5-RELATED 1 571 - -
Pvu9g1957 584 MobiDBLite consensus disorder prediction 420 444 - -
Pvu9g1957 584 MobiDBLite consensus disorder prediction 527 575 - -
Pvu9g1957 584 MobiDBLite consensus disorder prediction 416 494 - -
Pvu9g1957 584 ProSiteProfiles IQ motif profile. 122 144 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1957 Pvu-Chr9 28104208 28111942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1957 1 584 IQD Protein Family AT1G74690 43.222 3.70e-120 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1957 - - gmx:100786022 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1981 3 40422342 40430126 Pvu9g1957 9 28104208 28111942 ECH
Pvu2g0920 2 14854424 14859816 Pvu9g1957 9 28104208 28111942 ECH
Pvu3g0705 3 10066385 10071926 Pvu9g1957 9 28104208 28111942 ECH
Pvu9g1957 9 28104208 28111942 Pvu9g1957 9 28104208 28111942 ECH