Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1956 ATGAGAACCACTCTCACCGGTTTGCCGTTGGTGTTCCAACAATTCAGAGCTCTGTTGAAGAAGAATCTGTTACTGTCATGGCGGAACAAGAGAGCCACCCTTCTGCAATTGATCTCCCCTCTCATATTCATTTTCCTCATATTCGCAATCGACAAGGCCATTAAGGCGCAGACATCAACCTCCTCCGCCTACAAGACCGTCACCGACCCTCCCTCCCACCCCTCTCCTCCCATAACTCCCTGCGAAGACAAGTTCTTCATCAAACTCCCCTGCTACGACTTCGTTTGGAGCGGTGATCAAAGCACCACCTTCCAAACCATCGTCACCCGCATCATGAACAACAACCCCGGCAGACCCATCCCTCCCTCCAAGGTGAAGTCGTTTAAGGACAAGACCGAGGTGGATGCGTGGCTGTTCAGTAATCCTATGCGTTGTCCAGGGGCGCTTCATTTCTCGCAGCTAAACGGCACCGTTATAAGCTACGGTCTTCAGACCAACTCCACCAGCCTTCAGAGGCGAGGCAAATATGAGGACCCTACTATGTCGTTTCAACTTCCTCTTCAGCTTGCCGCCGAGAGGGAAATTGCCAGACACCTTATTGGAGACCCGGGTTTCAGTTGGAATGTGTTTCTGAGGGAATTCGCGCACCCTTCCATGAGTCCTTTCTCTGCCGTGGGTTCAATTGGTCCCGCGTTTTTCCTCGCCATTGCCATGTTTAATTTTGTTCTTCAGATAAGTTCTTTGGTGACGGAGAAAGAGCTTAAACTTCGCCAGGCAATGACTATGATGGGCCTTTACGACTTTGCTTACTGGTCGTCCTGGCTCATTTGGGAGACGGTTGTCACAATCATATCTGCCCTCCTCATAGTACTCTTTGGAATGATGTTCCAGTTCAGTTTTTTCTTGAAAAACAGTTTCGCAGTCCTGTTTGTTTTGTTCTTCCTATTTGAACTTAATATGACTGGCTTGGCCTTCATGTTATCTGCTTTCATTAAGAAGTCATCTTCGGCAACAACAATGGGATTCTCTATATTTATTGTGGGCTTTTTGACTCAGCTTGTGGTTCAAGGAGGGTTTCCTTACACGGATAGTTTCTCCAAAACTTTACGAGATTTGTGGTCGTTATTCCCACCCAATCCTTTTTCTCAAGGTATAAAAGTGCTTTCAGATGCAGTTGCAACTTCTGAAGACGATGGTGTTAGCTGGAGTAGACGCGGAGAATGTGCTCTTACTGATGCAGACTGTGTTATAACTATTGATGATATTTATAAATGGCTTGCGGCTACATTTGTTCTCTGGTTTGTTCTGGCCATTTACTTTGACAATATAATCCCAAATGCATCGGGTGTGAGGAAGTCAATATTCTACTTTCTAAATCCCGGTTATTGGTTGGGAAAAGGGGGTCAAAAAGTGAAAGAGGGTGGGCTTTGTAGTTGTGTAGATTCAAACCCACGTCAGGAAATAAGTACACCTGATGATGAAGATGTCCTTGATGAAGAAAGCAAAGTGAAACAGCAACTAACAGAAGGGCTGGTTGATACAAATATTGCTGTTCAAATGCATGGCCTTGCAAAGACCTATCCCGGTACACGTAACATTGGTTGCTGCTGCAAATGTAAAAAAACTGCTCCTTACACTGCCGTTAAGGGTTTGTGGGTGAACTTTGCAAAGGATCAGTTGTTTTGTCTTCTAGGACCCAACGGAGCTGGAAAAACGACAGCTATTAATTGTTTGACAGGGATAACTCCAGTAACTAACGGAGATGCGTTGGTTTATGGACATTCAATCAGAAATTCTATTGGCATGTCAAATATTCGAAAGCTTATAGGAGTATGTCCACAGTTTGATATACTATGGGATGCACTGTCTGGCCAAGAACACCTCCAACTCTTTGCTACTATTAAAGGCCTGCCCCCAGCTTCCATAAAATCAATTACCCAGACTTCATTAGCAGAGGTGAAACTCACGGATGCAGCCAAAGTCAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTCAGTGTTGCAATTGCCCTTATTGGTGACCCTAAGTTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGAAGGCATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTGTTCTTACAACGCACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCATAGGAATCATGGCAAAAGGAAGACTTCGCTGCATTGGCACCTCAATCAGATTAAAATCACGCTTTGGTACTGGTTTTATTGCTAATCTCAGTTTCTTTGGAAACAATATTGAACGCAGTCCTACCAATGGAGATGCAATATCTACGGAGCATCGAGAGGAAGTGAAGAAATTCTTTAAGAATTATTTAAATGTTGAGCCAAAAGAGGAGACCAATAACTTCGTAACTTTCGTGATTCCCCATGACAGAGAGGCGCTCCTAACAAATTTCTTTTCGGAGCTCCAAGATAGAGAAGAAGAATTTGGCATTTCTGACATACAGCTTGGTCTTACAACTCTCGAAGAAGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAATGCTACAGCCGAAGGAAGGCTAATAACCCTGACCTTAACATCTGGGGAATCCGTGCAGATTCCTGTAGGAGCTAGGTTTGTGGGAATTCCAGGAACACAGTCTGTGGAAAACCCAACTGGGTTTATGGTAGAAGTTTACTGGGAGCAAGATGATACTGGGACCCTATGCATTGCTGGCCACTCGCAGAAGGTTCCTATTCCTGATGGCGTTCAATTATCATCCTCATTTTCTGCAAGACAACGTAGAAACTTAGGCCGGGCAGGACCAATTCATGGGGTTGTGATTGATCCAAGTCAAGTTAGTCCAGGTGATTTTCAGCGATAA 2907 0.4451 MRTTLTGLPLVFQQFRALLKKNLLLSWRNKRATLLQLISPLIFIFLIFAIDKAIKAQTSTSSAYKTVTDPPSHPSPPITPCEDKFFIKLPCYDFVWSGDQSTTFQTIVTRIMNNNPGRPIPPSKVKSFKDKTEVDAWLFSNPMRCPGALHFSQLNGTVISYGLQTNSTSLQRRGKYEDPTMSFQLPLQLAAEREIARHLIGDPGFSWNVFLREFAHPSMSPFSAVGSIGPAFFLAIAMFNFVLQISSLVTEKELKLRQAMTMMGLYDFAYWSSWLIWETVVTIISALLIVLFGMMFQFSFFLKNSFAVLFVLFFLFELNMTGLAFMLSAFIKKSSSATTMGFSIFIVGFLTQLVVQGGFPYTDSFSKTLRDLWSLFPPNPFSQGIKVLSDAVATSEDDGVSWSRRGECALTDADCVITIDDIYKWLAATFVLWFVLAIYFDNIIPNASGVRKSIFYFLNPGYWLGKGGQKVKEGGLCSCVDSNPRQEISTPDDEDVLDEESKVKQQLTEGLVDTNIAVQMHGLAKTYPGTRNIGCCCKCKKTAPYTAVKGLWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTNGDALVYGHSIRNSIGMSNIRKLIGVCPQFDILWDALSGQEHLQLFATIKGLPPASIKSITQTSLAEVKLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANLSFFGNNIERSPTNGDAISTEHREEVKKFFKNYLNVEPKEETNNFVTFVIPHDREALLTNFFSELQDREEEFGISDIQLGLTTLEEVFLNIARQAELENATAEGRLITLTLTSGESVQIPVGARFVGIPGTQSVENPTGFMVEVYWEQDDTGTLCIAGHSQKVPIPDGVQLSSSFSARQRRNLGRAGPIHGVVIDPSQVSPGDFQR* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1956 968 SMART AAA_5 557 741 IPR003593 -
Pvu9g1956 968 ProSitePatterns ABC transporters family signature. 666 680 IPR017871 GO:0005524
Pvu9g1956 968 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 8 951 IPR026082 GO:0016021|GO:0055085|GO:0140359
Pvu9g1956 968 Pfam ABC-2 family transporter protein 32 439 - -
Pvu9g1956 968 Pfam ABC transporter 551 693 IPR003439 GO:0005524
Pvu9g1956 968 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 518 764 IPR003439 GO:0005524
Pvu9g1956 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 544 746 IPR027417 -
Pvu9g1956 968 MobiDBLite consensus disorder prediction 949 968 - -
Pvu9g1956 968 Gene3D - 509 762 IPR027417 -
Pvu9g1956 968 CDD ABC_subfamily_A 518 752 - -
Pvu9g1956 968 PANTHER ABC TRANSPORTER A FAMILY MEMBER 11 8 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1956 Pvu-Chr9 28093943 28100273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1956 561 763 Calmodulin-binding Proteins AT2G36910 24.883 3.47e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1956 - - gmx:100786538 1689.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1956 9 28093943 28100273 Pvu9g1956 9 28093943 28100273 ECH