Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1955 ATGGCAAACGAACCGGCGAGCTTCTGGACTCAGGCAAACGCACTCCTTAGGAAGAATTTAACCTTTCAGAAGCGAAATGTTAAAACAAACGTTCGACTCATCATGTTCCCGTTCCTGTTGTGTCTGTTGCTGGTTCTGCTCCAACGCCTGGTGGATACTCAATTGGACAAGGCAGAGAACAAGTGTGGGTGCGTTTGTGTGAGGAGACAAGGGGACACGTGTGTGGAGGAGCAGTGCGGGCTTGAGCATTCGGATTTGGACCAAGTTTCGACCTGCCCTGTTCCCAATCCTCAGGAATGGCCTCCTCTGTTGCAAGTGCCGGCTCCACAGTACCGAGCTGTGAGAACAGACAATTTTCCCTTTTCCGATTATCCAAACGCCTCCTGCAGGAGGAATGGCTCCTGCCCTGTCACTATGCTCTTCACTGGCACAAATCAGTCTTTTGGAGAAGCCATATCTGGGAATATGATCCCAAGTTCCTTCACTCCTATAAACAGCTCTGCTGTTATGGCTAGTTTGGCAGCAAATGTCGCTGGATCAGCCTCAATGACAGAGAACACCAATTTTCTGGAACCTGCTTTCTTTTCGGATGAACCTATTTATTATCTACAAAGTCAGTGCACGCAGAACTCTACATTTTCCATTTCTATTGAGCTATCAGCAGCAACTAGCAGACAACAAGAGTTAGTTTGCGCTGAGGGTTTACCTTTATGGCGTAATAGTGCTTCTGAAGTGAACAATGAGCTATATAGAGGCTATCGGAAAAGTAATCTAGAGGAACAAATCGAAGAGATAGCTGCAGGTTATGATTTTTTAAATTCAAATGGGAACATATTTAATGTCAGCATATGGTACAACTCCACCTACAAAAACGACACTGGTTCTAGTCAAATTGCATTGGCGCGTATTCCTCGTTCTGTTAATTTGGTATCAGATGCCTACCTCCAGTTTCTGTTGGGACCTGGTACCAGAATGTTTTTTGAGTTTGTGAAGGAAATGCCAAAACCTTCAACCCCAATTAAATTTGATTTAGCTTCTCTTTTGGGTGCTCTCTTCTTTACATGGGTCATCCTGCAACTTTTCCCTATTGCCTTGACAACGCTAGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCGTATGGCTATTTTCTTGCCATATCTATTGTCTACATGCTGTGTTTGGTGATATTTGGCTCAGTCATAGGGTTGAATTTCTTCACAATGAATGCTTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAATTTACAAATTGTACTGGCTTTTTTGCTGGCTTCCGTGTTTTCAAATGTTAAAACTGCTACAGTAATTTCATATATAGGTGTGTTTGGAACTGGGCTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAGACACATCATTTCCGAGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGGTTTGCATTATATCGTGGGTTGTATGAGTTTTCGCAATATTCCTTTAGTGGGGATGCTTTGGGGACTGATGGTATGCGCTGGAGCGATCTGAATGATAGCGCAAATGGCATGAAGGAGGTCTTAATTATAATGTTTGTGGAGTGGCTTCTGGTGCTTTTCTTTGCTTATTATATCGATCAAGTTTTGTCATCTGGAAGCAGAAAAAGTCCTCTTTTTTTCTTGAAAGGATTTCAGAAAGAGTCTCATTCATCTTTTCGGAAGCCTAGTATCCGAAGGCAGAAATCTAAGGTGTTTGTTCAGATGGAGAAACCTGATGTCGCTCAAGAGAGGGAGAAGGTGGAGCAACTGCTACTTGAACCGACCATTAATCAAGCAATTGTATGCGACGACCTGAAAAAGGTCTACCCGGGGAGGGATGGTAACCCTGAGAAATTTGCAGTGAGAGGGTTGTCCCTTGCTTTGCCTCAAGGAGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCCTTTATCAATATGATGATTGGTCTCACGAAGCCAACCTCCGGTACAGCATTTGTTCAAGGTCTTGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAGCATGATTTGCTGTGGGAATCTCTGACAGGAAGAGAGCATCTACTCTTTTATGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTGACAGAAGCGGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTTATGGAGGAGTTGCAGATAAACAAGCTGGAAAATACAGTGGAGGAATGAAAAGGAGGCTTAGTGTCGCAATTTCATTGATTGGAGATCCTAAAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTGAAGCGTGCAAAACAAGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAGGCAGAAGTCCTATGCGATCGATTAGGAATATTTGTAGATGGAAGCTTGCAGTGCATAGGAAACCCAAAGCAGTTGAAAGGTAGGTATGGAGGAAGTTATGTGTTCACAATGACAACAGCTGTGGATGATGAAAAGGATGTAGAGAATTTGGTGCGAGGGCTTTCACCAAATGCTAACAAGATCTACCACATCTCTGGTACACAAAAGTTTGAGCTACCAAAGGAGGAGGTTAAAATAGCAAATGTATTCAAAGCAGTTGAAACTGCAAAGAGAAGCTTCACCGTTTCAGCATGGGGTTTAGCTGATACCACATTGGAAGATGTCTTCATCAAAGTTGCACGTGGGGCTCAGGCATTTGACACTTTGTCATAG 2841 0.4245 MANEPASFWTQANALLRKNLTFQKRNVKTNVRLIMFPFLLCLLLVLLQRLVDTQLDKAENKCGCVCVRRQGDTCVEEQCGLEHSDLDQVSTCPVPNPQEWPPLLQVPAPQYRAVRTDNFPFSDYPNASCRRNGSCPVTMLFTGTNQSFGEAISGNMIPSSFTPINSSAVMASLAANVAGSASMTENTNFLEPAFFSDEPIYYLQSQCTQNSTFSISIELSAATSRQQELVCAEGLPLWRNSASEVNNELYRGYRKSNLEEQIEEIAAGYDFLNSNGNIFNVSIWYNSTYKNDTGSSQIALARIPRSVNLVSDAYLQFLLGPGTRMFFEFVKEMPKPSTPIKFDLASLLGALFFTWVILQLFPIALTTLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISIVYMLCLVIFGSVIGLNFFTMNAYSIQFVFYFIYINLQIVLAFLLASVFSNVKTATVISYIGVFGTGLLAGFLFQFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQYSFSGDALGTDGMRWSDLNDSANGMKEVLIIMFVEWLLVLFFAYYIDQVLSSGSRKSPLFFLKGFQKESHSSFRKPSIRRQKSKVFVQMEKPDVAQEREKVEQLLLEPTINQAIVCDDLKKVYPGRDGNPEKFAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTEAVEESLKSVNLFYGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKQLKGRYGGSYVFTMTTAVDDEKDVENLVRGLSPNANKIYHISGTQKFELPKEEVKIANVFKAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFDTLS* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1955 946 Gene3D - 616 878 IPR027417 -
Pvu9g1955 946 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 5 946 - -
Pvu9g1955 946 SMART AAA_5 654 837 IPR003593 -
Pvu9g1955 946 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 5 946 IPR026082 GO:0016021|GO:0055085|GO:0140359
Pvu9g1955 946 Pfam ABC transporter 646 790 IPR003439 GO:0005524
Pvu9g1955 946 Coils Coil 255 275 - -
Pvu9g1955 946 ProSitePatterns ABC transporters family signature. 763 777 IPR017871 GO:0005524
Pvu9g1955 946 Pfam ABC-2 family transporter protein 253 554 - -
Pvu9g1955 946 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 861 IPR003439 GO:0005524
Pvu9g1955 946 CDD ABC_subfamily_A 628 849 - -
Pvu9g1955 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 852 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1955 Pvu-Chr9 28074584 28082852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1955 628 853 Calmodulin-binding Proteins AT2G36910 24.066 8.02e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1955 - - gmx:100805474 1709.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1955 9 28074584 28082852 Pvu9g1955 9 28074584 28082852 ECH