Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1950 | ATGTCTGGCAGGAGAAACTCCAGAACTTCAAAATTCACAGAAAGTGGGATTAATGATCTAATGATGAGGCTACAAGCACTGCTGCCAAAACTAAACCAAAGAAGCGACTCAAGGGTATTACACACCAAGGCATCAGTAAGCATGATGCAGATCATAAAGGAAACTTGCTCTCACATCAGTATGCTTCAGAGAGAGGTAAAAGAGCATGGTGAAAGGCTAGCAGAGTTAGTGAATTCTGCATACACTAGTGATGTTGACGAGGAGTGTCTTAGAAAACTTCATCTCTGA | 288 | 0.4167 | MSGRRNSRTSKFTESGINDLMMRLQALLPKLNQRSDSRVLHTKASVSMMQIIKETCSHISMLQREVKEHGERLAELVNSAYTSDVDEECLRKLHL* | 96 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1950 | 95 | Coils | Coil | 59 | 79 | - | - | |
Pvu9g1950 | 95 | PANTHER | DNA BINDING PROTEIN | 1 | 93 | IPR044172 | - | |
Pvu9g1950 | 95 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 16 | 80 | IPR036638 | GO:0046983 | |
Pvu9g1950 | 95 | PANTHER | DNA BINDING PROTEIN | 1 | 93 | - | - | |
Pvu9g1950 | 95 | Gene3D | - | 8 | 89 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1950 | Pvu-Chr9 | 27971210 | 27971969 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g1950 | 12 | 83 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G74500 | 39.189 | 1.79e-10 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1950 | - | K03657 | pvu:PHAVU_009G188800g | 187.193 |