Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1937 ATGAGTAAGAGACAGGTGGTGCTGAAAAGAGATGTGGCCAACACTTCATCTTCAGTGATCAGAAATGTAAGATATGGGGAGTGCCAGAAGAATCATGCAGCCAATATTGGAGGGTATGCAGTGGATGGTTGCAGGGAGTTCATGGCTAGTACAGGGGATGGAGGTGGTGGGGCTCTTACATGTGCTGCTTGTGGCTGCCACAGGAACTTCCACAGAAGGGAAGTGCAAACTGAGGTAGTATGTGAGTACTCTCCTCCAAATTCTTCTCGCTAA 273 0.4835 MSKRQVVLKRDVANTSSSVIRNVRYGECQKNHAANIGGYAVDGCREFMASTGDGGGGALTCAACGCHRNFHRREVQTEVVCEYSPPNSSR* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1937 90 Pfam ZF-HD protein dimerisation region 22 75 IPR006456 -
Pvu9g1937 90 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 24 75 IPR006456 -
Pvu9g1937 90 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 74 IPR006456 -
Pvu9g1937 90 PANTHER MINI ZINC FINGER PROTEIN 3 3 87 - -
Pvu9g1937 90 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1937 Pvu-Chr9 27728410 27728682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1937 1 89 Zinc finger-homeobox gene family AT1G18835 76.667 3.30e-42 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pvu9g1937 ZF-HD_dimer 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1937 - - gmx:100785967 161.77