Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1931 ATGAATTGTTATTATCCTCATGACATTTTATTTGAAACTTTTCCGCTTGAACCAGCTCCACTAAGTTTTCATGACTATGACTTCAGTGATGTTAAAAATGTGCTTTCTGCGTGGAAAGAAGTTGACTGTTCAGATCACAAACCAGCGTTTTCGTCAAGCAACGATGGTGAAAGTGTGAATGCAATGAGGGAAGAAATGAAGGGTAAACACCGCAGAGAAGAGAGAATTAGTAACAGTGCGAGAATGTTGTCAAGGAAAACCGTTTCTCAGTACTTCTACATGCCAATATCACAAGCTGCTAAAGAGCTTAATGTTGGTCTCACACACTTGAAGAAAAGGTGTAGGGAATTAGGTATTCAAAGGTGGCCACATAGGAAGCTAATGAGTCTTCAAACCCTTATAAGGAATATGCAAGAGCAAGGACAGGGTGAGGGACCTCAAAATGATGAAAAAATAAGAACTGCCATTGAGATGTTGGAGAAAGAAAAAAGCTTGGTGGAGGAAAGGCCAGATTTGGAACTTGAAGATAAAACAAGAAGGCTTAGACAAGCCTGTTTCAAGGCTAACTACAAGAAGAGGAAACTCATGGGCATGAGGTTCATGGAACCTCAATCTTCCCTTGATGGCTTATCCGACAAGTATTGA 645 0.4031 MNCYYPHDILFETFPLEPAPLSFHDYDFSDVKNVLSAWKEVDCSDHKPAFSSSNDGESVNAMREEMKGKHRREERISNSARMLSRKTVSQYFYMPISQAAKELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIRNMQEQGQGEGPQNDEKIRTAIEMLEKEKSLVEERPDLELEDKTRRLRQACFKANYKKRKLMGMRFMEPQSSLDGLSDKY* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1931 214 Pfam RWP-RK domain 83 130 IPR003035 -
Pvu9g1931 214 ProSiteProfiles RWP-RK domain profile. 66 151 IPR003035 -
Pvu9g1931 214 PANTHER PROTEIN RKD4 20 203 IPR044607 GO:0003700
Pvu9g1931 214 PANTHER PROTEIN RKD1-RELATED 20 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1931 Pvu-Chr9 27654946 27655983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1931 2 198 AtRKD Transcription Factor Family AT1G18790 46.734 7.42e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pvu9g1931 RWP-RK 2.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1931 - - pvu:PHAVU_009G186900g 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1931 9 27654946 27655983 Pvu9g1931 9 27654946 27655983 ECH
Pvu3g1963 3 40195098 40197035 Pvu9g1931 9 27654946 27655983 PCT