Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1922 ATGGAAAACGTTTCAGTTCTGTGTAAGGAAGATCTTCAGATGGATTTGCCTCCAGGGTTTAGGTTTCACCCAACTGATGAAGAGCTTATTAGTCATTACCTTTACAGAAAGGTAACTGAGACTCACTTCTCAGCTAGGGCCATTGGAGAGGTGGACTTAAACAGGTCTGAACCTTGGGAATTGCCATGGAAGGCCAAAATGGGAGAGAAAGAATGGTACTTTTTCTGCGTGAGAGACAGAAAATACCCAACCGGTTTGAGGACCAACAGGGCCACTGAAGCAGGATACTGGAAGGCCACAGGGAAAGACAAAGAGATTTTCAGAGGGAAATCTCTGGTGGGAATGAAGAAAACTTTGGTTTTCTACAAAGGAAGGGCACCCAAGGGAGAGAAAACTGATTGGGTCATGCATGAATATAGACTTGAGGGTAAATTCTCTGTCCACAACCTCCCCAAAACTGCAAAGAGCGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGGTGTGAAGAAGACTCATATTTCTGGGATAATGATGTTGGACTCTTTCGGAAACGAATTGGCTTCTTCTGCTTTGCCACCTCTTACTGATTCCTCACCTTCCATTGGCAACACCAAAGCACTGAGTGTGACTGAACAGCCTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCCAAGAGCGATCTTTGATTCCTTGAGCAACACCAACATCAACAACAACAACACCCTTTACGGGGTTTCTTCAAACCATTCGTTTTACTCCACTCAAGGGGTTCACCTTCCGGCTCCACCAACTTTGCCATCACCCGGTTCTTCAAACCATTACCTTATCAGATCCTTCCTTCACAACCATGGAAAGGGATCACACTTGAGGAATGGCTTTGAATCAGAGAGGGAAATGGTCAGTGTCTCACAGGAAACAGGTGTTTCTGCTGATGTGAACGCTGAAACCTCTTCAGTTGTGTCACATCTTGAGATGAGTAAAAGGCTGTATGAGAATCAAAACAACGCAATTGGTTCTGCTGCACCAGCGGACCTAGCTAGCTTGTGGAACTACTGA 1065 0.4545 MENVSVLCKEDLQMDLPPGFRFHPTDEELISHYLYRKVTETHFSARAIGEVDLNRSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKTDWVMHEYRLEGKFSVHNLPKTAKSEWVICRVFQKSSGVKKTHISGIMMLDSFGNELASSALPPLTDSSPSIGNTKALSVTEQPYVPCFSNPIDVPRAIFDSLSNTNINNNNTLYGVSSNHSFYSTQGVHLPAPPTLPSPGSSNHYLIRSFLHNHGKGSHLRNGFESEREMVSVSQETGVSADVNAETSSVVSHLEMSKRLYENQNNAIGSAAPADLASLWNY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1922 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 349 - -
Pvu9g1922 354 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Pvu9g1922 354 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Pvu9g1922 354 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Pvu9g1922 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 8 349 - -
Pvu9g1922 354 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1922 Pvu-Chr9 27509318 27510941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1922 14 354 NAC Transcription Factor Family AT5G07680 56.851 4.38e-128 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g1922 NAM 4.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1922 - - gmx:547650 578.556