Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1916 ATGGAGTCTGGCGAGGAGATTAATTTGAATATAGAAAGTGGGGGTGGAAATCATGGGAAGAGTGGTGATGGGTTCATTGATAGAAGTAAGGTGCGGATTTTGTTGTGCGATAACGATTCCAACAGTTCTCAAGTGGTTTTCACACTTCTTTTGGGGTGTTCTTATCAGGTGACCTTAGTAAAGTCGCCGAGACAGGTAATTGACGCACTGAATGCAGAGGGGCAACATATAGATATCATACTGGCTGAACTTGACCTTCCAACAAAAAAGGGCATGAAGATGTTGAAGTACATAGCACGGGATAAAGAGTTTCGCAGAATCCCTGTTATAATGATGTCCGCACAAGATGAGGTATCCGTTGTTGTTAAGTGCTTGAGACTTGGAGCTGCTGACTATCTAGTAAAGCCCTTACGTACTAATGAACTATTAAATTTGTGGACGCATATGTGGAGACGGAGGCGCATGCTTGGACTCGTAGAGAAGAACATCTTGAGTTATGAGTTTGATATTGTAGCATCAGACCCCAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAGAGAAGCAACAATCCAGAGGTGGGATTACCAGTCCAACAAGAGCAAGAGTCTTCTATTGCAATTGGTGCTGCTGTTGTGGAACCTCTAGATGCTCATGCATCAGAGCACAGGCCTGATGTGGATGGATTTAATGATCACCGAACAGCACATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATAGGGGAGTCATCAGCCTTTTTCACGTATGTTAAAGCATCTATACTGAAGAGCAACTTTGAAGGGGTTGTTAATGTAGACAACAATGGTGCTGCACATGTGAGGATGGAAGCTATGCATCAAGCATGTGCGCAACAAGGGGTGAATGACCTTCAAACACGTGAAAATGGAGAGACCTGTGAAAGTCAATCGCAAGATGACTTACCCAGCTGCAGTAGTGTACCTGATTCTCTCTCTATTGAAAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCACCGCAAAAGCACAAGGATAAAAATTTCCATCAGGGTGTGATGCATCCAAGAAATGGGACTCATTGTTCTGAGCATGAAGTATCTGGCATGGCTTCCCAACATACTTATCCATATTATATTTCAGGAGGTTTTAATCATGTTATGATGCCTTCATCTGCCCAAATGTATCACCAAAAGAATATGCAGGACCTACAGAATCATCATAGTGCAGCTATGATTGCTCAATACAGTCATCTTCCCCAAGGTGGTCCTCACGGAACGGGGATGGCATCTTTCCCATACTACCCGATGAGTATATGCTTACAACCTGGTCAGGTTCCTCAACCCCATTCATGGCCATCATTTGGAAGCTCAAGTTCATCAGAAGCAAAATTAAGTAAAGTTGACAGGAGAGAAGCAGCACTAATGAAGTTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTTAACCGGAAACGACTTGCTGAAAGGCGGCCTCGAGTGAGGGGACAATTTGTCAGAAAATTAAACGGCGCCAATATGGATCTCAATGGACAGCCTGCATCAATAGACTATGATGAAGATGATGATGAAGAGGATGAAGATGACCAGGGAGCAAGAGATTCTTCTCCTGAGGATGCTTGA 1686 0.4348 MESGEEINLNIESGGGNHGKSGDGFIDRSKVRILLCDNDSNSSQVVFTLLLGCSYQVTLVKSPRQVIDALNAEGQHIDIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYEFDIVASDPSDANTNSTTLFSDDTDDKSKRSNNPEVGLPVQQEQESSIAIGAAVVEPLDAHASEHRPDVDGFNDHRTAHFSSGPKKSELRIGESSAFFTYVKASILKSNFEGVVNVDNNGAAHVRMEAMHQACAQQGVNDLQTRENGETCESQSQDDLPSCSSVPDSLSIERSCTPPASMEVSPQKHKDKNFHQGVMHPRNGTHCSEHEVSGMASQHTYPYYISGGFNHVMMPSSAQMYHQKNMQDLQNHHSAAMIAQYSHLPQGGPHGTGMASFPYYPMSICLQPGQVPQPHSWPSFGSSSSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGANMDLNGQPASIDYDEDDDEEDEDDQGARDSSPEDA* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1916 561 MobiDBLite consensus disorder prediction 179 209 - -
Pvu9g1916 561 MobiDBLite consensus disorder prediction 310 346 - -
Pvu9g1916 561 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Pvu9g1916 561 ProSiteProfiles CCT domain profile. 480 522 IPR010402 GO:0005515
Pvu9g1916 561 SUPERFAMILY CheY-like 27 156 IPR011006 -
Pvu9g1916 561 MobiDBLite consensus disorder prediction 310 353 - -
Pvu9g1916 561 MobiDBLite consensus disorder prediction 536 561 - -
Pvu9g1916 561 MobiDBLite consensus disorder prediction 455 472 - -
Pvu9g1916 561 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 3 543 - -
Pvu9g1916 561 SMART REC_2 31 146 IPR001789 GO:0000160
Pvu9g1916 561 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Pvu9g1916 561 Gene3D - 31 231 - -
Pvu9g1916 561 Pfam CCT motif 480 522 IPR010402 GO:0005515
Pvu9g1916 561 MobiDBLite consensus disorder prediction 520 561 - -
Pvu9g1916 561 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 543 IPR045279 GO:0009736
Pvu9g1916 561 MobiDBLite consensus disorder prediction 455 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1916 Pvu-Chr9 27386737 27392574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1916 20 560 Response Regulator Gene Family AT5G61380 50.000 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pvu9g1916 Response_reg 4e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1916 K12127 - gmx:100799728 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1916 9 27386737 27392574 Pvu9g1916 9 27386737 27392574 ECH