Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1909 ATGGATGAAGATGCAAAGGCGCATGCATGGCCCAGTTCCAACCCAACCAAGTCGAAAGTAACACTTTTTTCATACTCAGAAGTACATTCCATTCCCATGGCTCTCTTCCGAAGGTTCTTTTACCGGAAACCACCAGATCACCTCCTCGAGATCTCCGACAGACTCTATGTTTTTGATTGTTGCTTCTCCAAGAATGTGTTGGAGGAAGAGGAGTACAAGGTTTATATTGGGGGGGTTGTGGCTCAGCTTCAGGATCACTATCCGGATGCTTCTTTCATGGTGTTCAATTTCAGAGAAGGGGATAGGCGCAGTCGAATTTCAGACATAATGTCTCAGTATGAGATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCCCTTTTGCCATTGGAGATGATTCACCACTTCCTTCGGTCAAGTGAGAGCTGGTTGTCTTTGGAGGGAAAACAAAACGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCTGTGCTTGCGTTTATGCTAGCTGCTCTTCTGTTGTACAGGAAACAGTACAATGGGGAACACAAGACTCTTGAAATGGTGTACAAGCAAGCACCTAGAGAACTTCTCCACCTTCTATCCCCTTTGAATCCACAACCTTCTCATTTGAGATATCTTCAGTACATTTCCAGGAGGCATTTGGGTTCTCAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGCATTATTGTGAGGGTCCTTCCATTGTTTGACGGTGGAAAAGGATGCAGACCGCTTGTGCGTGTCTATGGTCCAGACCCTTCAAAACCTTCCAACAGAAGTTCTAAGCTTCTTTCCTCAACTTCAATGGGCCAAAATCAAGTTCGCCACTACTTGCAGGCAGAATGTAGGCTCGTGAAAATTGACATCCGTTGTCATGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGACTTTGTTCGTGAGGAGGTGATGTTCAGAGTCATGTTTCATACTGCGTTTGTAAGGTCAAATATATTGACGCTGAGCCGTGATGAAATTGATATTCAGTGGGATGCAAAGGATCAGTTCCCCAAGGACTTCAAATTTGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAAACACAGAAGATGCAAGTGACACAGAATGTGCTTCACCTGAGGCTGAGGAATTCTATGAAGCAGAAGAGATCTTCAGCAATGTAATTGATGCTATGGAAGGTAAGGGAGATTACGATTTTCCAATGGTTTATGACAGTGTAGTAGATGAGGGAAGTCATAAAGAGGTCTGGAAAGAGTATTCAGATCCTCGTACTTTTCTGGATTCCCTGTTAGATGATGGGATTCACCAACAGGTTGATGATGCGAGGTACAAGCTTGACAAGAGGGTGGTTTTAGATACTCATGCTGTCAAAGATATTGGAGTGGATTATGGGATAACTTTTATGACAAAGGGAGTCACTGTGAATGCTCATGATAAATTGGCAGTTATGCAAAACAAATATGATGAAGATAACAATGAAACAGAAGAAGGGTTGCAGCTGCTTCATATTTCTAGACCAAAATCGGATAAATTACTTCCTACAAACTCAAAGCCCATGGGCGATTCAGTTGTAGCAAACCAAAAGACTAAACACCAAGAACCACATGGTTTTCAGGCAAATCATGCAAAACTCAATGCAACAACTAGGTCGGTTCCTTCTAGTAAGGATTCTTTTCAAGATTCCATGCATGTCTCATATCCACCATCAAGGAACAATAGTTCACCACTTACATTGTCACATGTTACCTCTGAAAAGGACGAAACCATTGATGCCAAAGGAAAATCTACTTCTAGTTCTCATGTCTCTGAAGCAATTGTTTTTATGGACACGATAAATGATTTGAAAAGCTGTGATGGTGATAACTCAAAATCTTCAGACACTGTAACAGAAATAGGCTCAAACTCTCCACTATCATCATTGCTGTCAGTCAAAGAGACATATCTTCAGTTAGCTAATCAAGCACCACAACAGAGCTATGATCAAATGTTACAACTTCCTCCACCTCCACCTCCTCCTCCTCCTCCAATTTTTGGGCAAAATAGAGGGAGCTTTATGACTCCTACCCATTGGAAATCTGTTGGACAAAATAATGGGGCTTTACCTCCTTCTCCCCCTACTCCTCCCACTGCAAATGGTGTAATTACATCTAAAGTTTCACTACCACCACCACCACCACCTCCTCCTCCTCCCCCTCCTTTGCAGTCTACAAATGGAGCTCCATTCCCTTCTCCCTCAATGTCTCCAACAAAGTTTAAAGCTCCTCCTCCTGCACCACCACCACCACATTATCCTCCACCTCCTTTAAGTAAATCTACACCACTTCCTCCTCCTCCTTCCAGTAATGCTCCACCAGCACCACCACCTCCTCCTCCTTTAAGTACTGCTCCACCACCACCACCTCCTCCTCCTTCTCTATCCAGAGCTTCACCTCCACCACCACTTCTTCCACCATCAAGTGGAGCACCACCTCCACCACCATCTTCTTCACTGTCCAGAGCTCCACCTCCCCCACCTCCACCAAATCGTGGACCACCACCAACAACAATGCCTGGAGGCACAACTCCTCCACCACCTCCAGGTGGTCGAGGCCCACCTCCTACTGGAATGCGGGCTCCTCTTTCTCATTCTCCTCATGGACCTCTAGGTGGTGCTCATTTTCCTTCACCAATTGGAACTGATACAAGAGGGAGAGGCCGAGGACTTGGACGTCCTACAGGGGCTGGTGCCATGGCAACTCGGAAATCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGATGAACTACAAAGACGTGGAGAACTTCAAATAACACAAGAGTTTGACGTTTCAGAGATAGAGAAGCTTTTTTCTGCAAATGTTGCAAAACCTGCTGATTCAGATGGTAAATCTGGTGGGCGGCGCAAATCCGTTGGATCCAAAACTGACAAAATCCAATTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCTCTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGATTCAGTGCTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCAACCAAAGAGGAGATAGAGCTTTTAAAGGGATACACCGGTGATAAGGAGAATTTGGGGAAGTGTGAAAAGTATTTCTTGGAGCTGATGAAAGTGCCAAGAGTGGAGTCAAAACTTAGAGTATTCTCTTTCAAAATTCAGTTTGGGACTCAGATTACAGAGTTTAAGAAGAGCTTACACACAGTAAACTCTGCTTGTGAAGAGGTCCGAAACTCATTCAAACTAAAGGAGATCATGAAGAAAATTCTTTATTTGGGTAATACATTGAACCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTAGATAGTCTCTTAAAACTAACCGACACTCGTGCTTCAAATAGTAAAATGACACTCATGCATTTTCTTTGCAAGGTCCTAGCTGAAAGGTTTCCTGGACTCCTTGATTTTCACCTTGACCTTGTTAGCTTGGAAGCAGCCACTAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCAATCATCAGGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGAAAACGATGGCCCCGTGACTGAAGTTTTTCGTAAGACATCGAAGGAATTCATTGCTGTTGCAGGGTCAGAGGTGGCATCTGTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCCCTATATTTCGGTGAGGATCCTGCACGTTGTCCTTTCGAGCAAGTTACTGCAACTCTCTTGAATTTCACAAGGTTGTTTCTGAAGGCACATGAAGAGAATTGCAAACAAACAGTGTTAGAGAAAAAGAAAGCTGATAAAGAGGCTGAAATGGAGAAGGCTAAAGGCATTAACTTCATAAGGAAGAGTGGAAAAGATGAAGAAGAAGAATGTTGA 4038 0.4368 MDEDAKAHAWPSSNPTKSKVTLFSYSEVHSIPMALFRRFFYRKPPDHLLEISDRLYVFDCCFSKNVLEEEEYKVYIGGVVAQLQDHYPDASFMVFNFREGDRRSRISDIMSQYEMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGKQNVLLMHCERGGWPVLAFMLAALLLYRKQYNGEHKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSQWPPSETPLYLDCIIVRVLPLFDGGKGCRPLVRVYGPDPSKPSNRSSKLLSSTSMGQNQVRHYLQAECRLVKIDIRCHVQGDVVLECIHLSDDFVREEVMFRVMFHTAFVRSNILTLSRDEIDIQWDAKDQFPKDFKFEVLFLDADAVIPNLNTEDASDTECASPEAEEFYEAEEIFSNVIDAMEGKGDYDFPMVYDSVVDEGSHKEVWKEYSDPRTFLDSLLDDGIHQQVDDARYKLDKRVVLDTHAVKDIGVDYGITFMTKGVTVNAHDKLAVMQNKYDEDNNETEEGLQLLHISRPKSDKLLPTNSKPMGDSVVANQKTKHQEPHGFQANHAKLNATTRSVPSSKDSFQDSMHVSYPPSRNNSSPLTLSHVTSEKDETIDAKGKSTSSSHVSEAIVFMDTINDLKSCDGDNSKSSDTVTEIGSNSPLSSLLSVKETYLQLANQAPQQSYDQMLQLPPPPPPPPPPIFGQNRGSFMTPTHWKSVGQNNGALPPSPPTPPTANGVITSKVSLPPPPPPPPPPPPLQSTNGAPFPSPSMSPTKFKAPPPAPPPPHYPPPPLSKSTPLPPPPSSNAPPAPPPPPPLSTAPPPPPPPPSLSRASPPPPLLPPSSGAPPPPPSSSLSRAPPPPPPPNRGPPPTTMPGGTTPPPPPGGRGPPPTGMRAPLSHSPHGPLGGAHFPSPIGTDTRGRGRGLGRPTGAGAMATRKSSLKPLHWSKVTRALQGSLWDELQRRGELQITQEFDVSEIEKLFSANVAKPADSDGKSGGRRKSVGSKTDKIQLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEIELLKGYTGDKENLGKCEKYFLELMKVPRVESKLRVFSFKIQFGTQITEFKKSLHTVNSACEEVRNSFKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHFLCKVLAERFPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIRGLEKVKQELAASENDGPVTEVFRKTSKEFIAVAGSEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFTRLFLKAHEENCKQTVLEKKKADKEAEMEKAKGINFIRKSGKDEEEEC* 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1909 1345 Gene3D - 239 368 - -
Pvu9g1909 1345 ProSiteProfiles Formin homology-2 (FH2) domain profile. 926 1327 IPR015425 -
Pvu9g1909 1345 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 232 368 IPR035892 -
Pvu9g1909 1345 Gene3D Protein tyrosine phosphatase superfamily 45 238 IPR029021 -
Pvu9g1909 1345 MobiDBLite consensus disorder prediction 546 616 - -
Pvu9g1909 1345 MobiDBLite consensus disorder prediction 679 934 - -
Pvu9g1909 1345 MobiDBLite consensus disorder prediction 560 601 - -
Pvu9g1909 1345 MobiDBLite consensus disorder prediction 766 885 - -
Pvu9g1909 1345 MobiDBLite consensus disorder prediction 522 541 - -
Pvu9g1909 1345 Coils Coil 1208 1235 - -
Pvu9g1909 1345 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1003 1329 - -
Pvu9g1909 1345 Pfam C2 domain of PTEN tumour-suppressor protein 231 368 IPR014020 -
Pvu9g1909 1345 Coils Coil 1302 1322 - -
Pvu9g1909 1345 Gene3D Formin, FH2 domain 927 1312 IPR042201 -
Pvu9g1909 1345 Pfam Formin Homology 2 Domain 931 1301 IPR015425 -
Pvu9g1909 1345 MobiDBLite consensus disorder prediction 681 697 - -
Pvu9g1909 1345 MobiDBLite consensus disorder prediction 737 757 - -
Pvu9g1909 1345 MobiDBLite consensus disorder prediction 700 718 - -
Pvu9g1909 1345 PANTHER FORMIN-J 33 779 - -
Pvu9g1909 1345 PANTHER FORMIN-J 827 1331 - -
Pvu9g1909 1345 SMART it6_source 685 1345 IPR015425 -
Pvu9g1909 1345 SMART PTEN_C2_2 230 370 IPR014020 -
Pvu9g1909 1345 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 44 220 IPR029021 -
Pvu9g1909 1345 ProSiteProfiles C2 tensin-type domain profile. 232 371 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1909 Pvu-Chr9 27263086 27280562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1909 33 605 FH2 protein (formin) Gene Family AT5G07740 59.603 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1909 - - pvu:PHAVU_009G184800g 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1909 9 27263086 27280562 Pvu9g1909 9 27263086 27280562 ECH