Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1908 | ATGGGGTGCGTGAGCTCGAAGCAAGCGGTGTCGGTGACGCCGGCGATTGACCACTCGGGCGCGTTTCGGACCAATGCTGCGGGTTTGGGCGAGTCGGAGCGGAAGGAGAAGAAGAGGAGCAAGAAGAGAACCGACTCGGGGGGAGGGAGTCAGAGCGAGGTAGGTGAGTCGGGGAGAACGAGTTCCAATTGCGACTCCCTGAGCTTCAGGTTGGGGAACCTTCACAAGTACGTGCAGGGAGAACACGTGGCCGCCGGCTGGCCGGCGTGGCTCAGCGCAGTCGCCGGCGAGGCCATTCACGGCTGGGTCCCCCTCCGCGCCGATGCCTTCGAAAAACTCGAGAAGATAGGGCAGGGAACGTATAGCAGTGTGTTTCGAGCGAGGGAGCTTGAAACGGGGAAGATAGTGGCATTGAAGAAGGTGCGGTTCGACAATTTTGAACCGGAGAGTGTGCGGTTCATGGCGCGTGAGATATTGATTCTGCGACGCCTTGATCATCCCAATATAATAAAGCTTGAGGGCTTGATTACTTCGAGGCTCTCCTGTAGCATTTACCTCGTCTTTGAGTACATGGAGCATGACATCACAGGGCTCTTGTCTTCCCCTGATATCAAATTCACTGAACCACAGATTAAGTGCTACTTGAAGCAGTTGTTGGCTGGTCTTGAGCACTGTCACCTGCGGGGAGTAATGCATAGGGATATTAAGGGGTCGAATCTTTTGGTGAACAATAAAGGGGTTTTGAAGGTAGCGGATTTTGGGTTGGCGAATTATGTCAATCCTGGGCACAGGCAACCTCTGACTAGTCGTGTTGTTACCTTGTGGTACCGGCCGCCAGAGCTTTTGCTCGGTTCCACGGACTATGGTCCAGCCGTGGATCTTTGGAGTGTTGGCTGTGTGTTTGCGGAGCTGCTTGTTGGGAAGCCTATACTTCAGGGGAGAACGGAGGTTGAACAATTGCACAAAATTTTTAAGCTATGTGGCTCCCCACCTGATGAATACTGGAAAAAGACTAGACTTCCTCATGCAACGTTATTTAAGCCTCAGCAACCATATGATAGTTGCCTTCGACAATCCTTTAAAGATTTACCAGCGACCAGTGTACATCTGCTACAAACTCTTCTTTCTGTAGAACCATACAAACGTGGGACTGCTACATCTGCTCTCTCATCGGAGTATTTCAAAACAAAACCTTATGCGTGTGACCCATCAAGCTTGCCGATATACCCACCTAGCAAGGAAATCGATGCAAAACACAGGGAAGAGTCAAGGAAAAAGGTTAGTGGACGAGTTCGTGGAACTGAAACAAGAAAACCATCCAGAAAGCCACTGGGATTCAGTAAACTAGCCCCAGCAGAGGATTTGGCAAGTCAAACTCAGACTTCCCAGAAGGTCAATGGTAGATCTTTCCGCAACCATGAAGAAGAGAAGATTAAAATAGGTGACAAAGCACAGAAGTCATCCAGTGGTAAAGCTGAAGATGCTTCCCATATGAAGAATGCTTCTCAAGGAGATATTCCCCTTTCTGGACCATTACAAGTTTCATCATCAAGTGGATTTGCATGGGCAAAAAGCCGAAAAGATGACGCCTCATTTCGATCCCATTGTCGAACTATTTCAAGAGGACATATTTTCAATCCATCAGAACAACCTTCTACATTAAATTCAAGGAATAATTTGGATACCGCAAACCAGGAAAATAAAGAGTTTTGTGGGGGATGCGTCAATTCTAGGGGCCAGCAGCTGCTTGAAATTTCTACGCTTTCAATGCAGAATCAGTGGAGTAAGTTTGATCGCCCAGATTCATTTGATGCTTCGGATGAGTACCATTCACAAGAACTGTCTATGACCCGTTATCACAGAGAAGATTCAGCATCCAAGAGAAATAACCTGAGTTTTCAAGATCAAGGAGAAAGGGTTGAATTTTCTGGGCCCCTGCTATCTCAGATGCACACTGTTGATGAGCTCTTGGAAAGGCATGAACGTCACATCCGGCGAACTGTCCGGAGATCATGGTTTCAGAGAGGTAAGAAGTCGAGGAAGTAA | 2046 | 0.4824 | MGCVSSKQAVSVTPAIDHSGAFRTNAAGLGESERKEKKRSKKRTDSGGGSQSEVGESGRTSSNCDSLSFRLGNLHKYVQGEHVAAGWPAWLSAVAGEAIHGWVPLRADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSSPDIKFTEPQIKCYLKQLLAGLEHCHLRGVMHRDIKGSNLLVNNKGVLKVADFGLANYVNPGHRQPLTSRVVTLWYRPPELLLGSTDYGPAVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYDSCLRQSFKDLPATSVHLLQTLLSVEPYKRGTATSALSSEYFKTKPYACDPSSLPIYPPSKEIDAKHREESRKKVSGRVRGTETRKPSRKPLGFSKLAPAEDLASQTQTSQKVNGRSFRNHEEEKIKIGDKAQKSSSGKAEDASHMKNASQGDIPLSGPLQVSSSSGFAWAKSRKDDASFRSHCRTISRGHIFNPSEQPSTLNSRNNLDTANQENKEFCGGCVNSRGQQLLEISTLSMQNQWSKFDRPDSFDASDEYHSQELSMTRYHREDSASKRNNLSFQDQGERVEFSGPLLSQMHTVDELLERHERHIRRTVRRSWFQRGKKSRK* | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1908 | 681 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Pvu9g1908 | 681 | Gene3D | Phosphorylase Kinase; domain 1 | 97 | 192 | - | - | |
Pvu9g1908 | 681 | ProSiteProfiles | Protein kinase domain profile. | 110 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu9g1908 | 681 | MobiDBLite | consensus disorder prediction | 413 | 442 | - | - | |
Pvu9g1908 | 681 | MobiDBLite | consensus disorder prediction | 47 | 62 | - | - | |
Pvu9g1908 | 681 | Gene3D | Transferase(Phosphotransferase) domain 1 | 193 | 432 | - | - | |
Pvu9g1908 | 681 | MobiDBLite | consensus disorder prediction | 405 | 513 | - | - | |
Pvu9g1908 | 681 | SUPERFAMILY | Protein kinase-like (PK-like) | 103 | 401 | IPR011009 | - | |
Pvu9g1908 | 681 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 674 | - | - | |
Pvu9g1908 | 681 | MobiDBLite | consensus disorder prediction | 29 | 46 | - | - | |
Pvu9g1908 | 681 | Pfam | Protein kinase domain | 110 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu9g1908 | 681 | MobiDBLite | consensus disorder prediction | 468 | 493 | - | - | |
Pvu9g1908 | 681 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 1 | 674 | - | - | |
Pvu9g1908 | 681 | MobiDBLite | consensus disorder prediction | 453 | 467 | - | - | |
Pvu9g1908 | 681 | SMART | serkin_6 | 110 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu9g1908 | 681 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu9g1908 | 681 | CDD | STKc_CDK9_like | 110 | 394 | - | - | |
Pvu9g1908 | 681 | ProSitePatterns | Protein kinases ATP-binding region signature. | 116 | 139 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1908 | Pvu-Chr9 | 27230379 | 27238422 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g1908 | 102 | 453 | Core Cell Cycle Gene Families | AT5G10270 | 48.370 | 3.93e-114 | 350 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Pvu9g1908 | Pkinase | 3.7e-68 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1908 | - | - | var:108332003 | 1269.6 |