Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1906 ATGAGCCACAAGCTTGTGTATCTCAATCTCTCCCATAATACTCTCGAGGGGGAGTTAAATCTAAAGGGATTGACTCAGTTGCAAACAGTGGACTTGTCTGTTAATAGGTTCCATGGGGAACTTGGGCTGAGTTTCCCTGCCATTTGTGAGAGTTTGGTGACTTTAAATGTTTCAGATAATCACTTGAGGGGTGAGATTCATGGCTTCTTTGATCAATGCTTGAAGCTGCAGTACTTGGATTTGAGCACCAACCATCTAAATGGGACCTTGTGGACTGGATTTTCCAGGCTGAGAGAGTTTTCTATCTCAGAGAATTTTCTAACTGGGGTTGTTCCTCCCCAGGCTTTTCCAGTAAACTGTAGCATTGAAAATCTGGACCTTTCAGTGAATGGATTTGTTGGTAAGGCCCCCAAGGAGTTATCTAACTGCAAGAATTTAGTGGTTCTCAACCTTTCTAGTAACAATTTCACTGGAGATATTCCCCGTGAAATTGGTTCCATTTCTGGTCTTGAGGGATTGTTCTTGGAGAACAATACTTTCTCAAGGGATATCCCAGAGACCCTTTTGACCTTAACCAATTTGTTCATCTTGGATTTGAGCAGAAACAAATTTGGTGGGGAGGTGCAGGAGATTTTTGGGAAATTCAAGCAACTGAAGTTTCTTGTGCTGCACTCAAATTCTTACACTGGAGGGTTAAACTCATCAAGCATATTTACATTGACAAACCTAAGCCGCTTGGACTTAAGCTTTAATAATTTTTCTGGTCCATTACCTGTTGAAATCTCACAAATGTCTGCACTCGCTTTCTTAACCTTAACCTACAACCAGTTCTCTGGACCTATTCCTTCTGAATTAGGAAAGTTGACTCGCCTTATGGCACTTGATCTTGCCTTCAACAGTTTCAGTGGACCGATCCCACCAAGCCTTGGAAACTTGACTTCTCTCTTATGGCTTACACTTTCAGATAATTCATTAACCGGAGAAATCCCACCAGAGTTGGGAAACTGCTCAAGCATGTTATGGCTAAACCTTGCGAACAACAAACTATATGGAAAAATTCCTTCCGATCTAACAAAAATTGGAAGGAATGCAAGGGCCACATTTGAATCAAATCAAAAGAATCTCGGGGGAGTTGTTGCTGGCAATAGTGAGTGCTTAGCAATGAAGAGATGGATACCTGCTGATTACCCTCCGTTCAGCTTTGTGTATAACATCCTGACAAGGAAGAATTGTAGGGCCCTTTGGGACAGGTTGCTCAAAGGATATGGCATCTTCCCCATGTGTACATCTGAGAACTCTGCTAGATCATCACACATAGCAGGGTATCTTCAGCTAAGTGGGAACTATTTGACTGGTGAGATTCCTTCAGAAATTGAGACCATGGTAAACTTTAGCATGTTTCATTTGGGAGATAACAAGTTCACGGGGAAATTCCCTCCAGGGATGGTAGGTTTACCACTTGTAGTCTTGAACATGACCAGAAACAATTTTTCTGGTGAAATTCCAAGTGATATTGGCAACATGAAGTGTTTACAGGACCTTGATTTGTCTAGGAACAATTTCTCTGGAACATTTCCCATAAGTCTGGCACACTTGGATGAGCTTAGCAGGTTCAACATCTCATACAATCCCCTCATATCTGGTACAGTCCCACCATCTGGACACTTACTCACTTTTGACAAGGATTCATATTTGGGTGACCCCCTCTTGAGCCTCCCAAAGTTCTTTAACATCTCTGATGATAGAAATAACACTTTACACAGAGTCTTGAAAAATCCCACAAAATGGTCTTTGGTTTTGGCTCTAGGACTGGCTATCGTGGTCTTTGGACTTCTTTTCCTTGTGATATGTTTCTTGGTGAAAAGTCCATCTGTGGGACCAGGATACCTCATGAAGAATATAAAGAAGCAAACACATGATTCAGGCAGCTCCGGATCCTCACCATGGTATTCTGACACAGTTAAGATATTCCACCTGAACAAGACAGTTTTCACACATGCAGATATCTTGAAAGCAACCTCCAACTTCACAGAGGAGAGAGTCATAGGAAGGGGTGGCTATGGAACAGTATATAGAGGGTCATTTCCAGATGGGAGAGAGGTGGCGGTGAAGAAGCTCCAAAGGGAAGGAACTGAGGGTGAAAAAGAATTCAGAGCTGAAATGAAGGTTCTAAGTGGTCATGGATTTAGCTGGCCTCATCCAAACCTTGTCACACTGTATGGTTGGTGCCTCTATGGTTCACAGAAGATACTCGTTTATGAGTACATAGGAGGTGGAAGCTTGGAGGAACTTGTGACTGATACAAAAAGATTGAGATGGAGAAGGCGCCTAGAAGTGGCAATTGATGTGGCCAGGGCACTTGTCTATTTACACCATGAGTGCTACCCTTCTATTGTGCATAGAGATGTGAAGGCTAGTAACGTGTTGCTAGACAAGAATGGGAATGCCAAGGTCACAGACTTTGGACTTGCTAGAATTGTTGATGTTGGAGACAGTCATGTGAGCACTATAGTGGCTGGCACAGTGGGCTATGTTGCACCAGAATATGGACAAACATGGAAAGCCACCACAAAAGGGGATGTGTACAGTTTTGGGGTGTTGGTTATGGAGCTAGCAACTGGGAGAAGAGCAGTGGATGGAGGGGAAGAGTGTTTGGTGGAATGGACTAGGCGTGTTATGATGGGTTCTGGAAGACAAGGGTTAGCTCAATCTGTACCAGTTTTGTTGAAGGGAAGTGGGGTAGTTGAGGGTGCTAAGGAGATGGGTGACTTGCTCCAAGTTGGAGTGAAATGCACACATGATGCACCACAGGCTAGGCCTAACATGAAGGAGGTTCTTGATATGCTTATTAAGATATATGATCCCACTGGGGACTCAAATTATGGATACCATGTGTAG 2898 0.4327 MSHKLVYLNLSHNTLEGELNLKGLTQLQTVDLSVNRFHGELGLSFPAICESLVTLNVSDNHLRGEIHGFFDQCLKLQYLDLSTNHLNGTLWTGFSRLREFSISENFLTGVVPPQAFPVNCSIENLDLSVNGFVGKAPKELSNCKNLVVLNLSSNNFTGDIPREIGSISGLEGLFLENNTFSRDIPETLLTLTNLFILDLSRNKFGGEVQEIFGKFKQLKFLVLHSNSYTGGLNSSSIFTLTNLSRLDLSFNNFSGPLPVEISQMSALAFLTLTYNQFSGPIPSELGKLTRLMALDLAFNSFSGPIPPSLGNLTSLLWLTLSDNSLTGEIPPELGNCSSMLWLNLANNKLYGKIPSDLTKIGRNARATFESNQKNLGGVVAGNSECLAMKRWIPADYPPFSFVYNILTRKNCRALWDRLLKGYGIFPMCTSENSARSSHIAGYLQLSGNYLTGEIPSEIETMVNFSMFHLGDNKFTGKFPPGMVGLPLVVLNMTRNNFSGEIPSDIGNMKCLQDLDLSRNNFSGTFPISLAHLDELSRFNISYNPLISGTVPPSGHLLTFDKDSYLGDPLLSLPKFFNISDDRNNTLHRVLKNPTKWSLVLALGLAIVVFGLLFLVICFLVKSPSVGPGYLMKNIKKQTHDSGSSGSSPWYSDTVKIFHLNKTVFTHADILKATSNFTEERVIGRGGYGTVYRGSFPDGREVAVKKLQREGTEGEKEFRAEMKVLSGHGFSWPHPNLVTLYGWCLYGSQKILVYEYIGGGSLEELVTDTKRLRWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKNGNAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWKATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWTRRVMMGSGRQGLAQSVPVLLKGSGVVEGAKEMGDLLQVGVKCTHDAPQARPNMKEVLDMLIKIYDPTGDSNYGYHV* 966
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1906 965 Gene3D Ribonuclease Inhibitor 427 585 IPR032675 -
Pvu9g1906 965 Gene3D Ribonuclease Inhibitor 1 210 IPR032675 -
Pvu9g1906 965 SUPERFAMILY Protein kinase-like (PK-like) 654 950 IPR011009 -
Pvu9g1906 965 ProSiteProfiles Protein kinase domain profile. 676 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1906 965 SUPERFAMILY L domain-like 188 547 - -
Pvu9g1906 965 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 956 - -
Pvu9g1906 965 SUPERFAMILY L domain-like 4 231 - -
Pvu9g1906 965 CDD STKc_IRAK 682 952 - -
Pvu9g1906 965 Gene3D Transferase(Phosphotransferase) domain 1 757 960 - -
Pvu9g1906 965 Gene3D Phosphorylase Kinase; domain 1 643 755 - -
Pvu9g1906 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Pvu9g1906 965 Gene3D Ribonuclease Inhibitor 211 384 IPR032675 -
Pvu9g1906 965 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 956 - -
Pvu9g1906 965 Pfam Protein kinase domain 676 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1906 965 ProSitePatterns Protein kinases ATP-binding region signature. 682 705 IPR017441 GO:0005524
Pvu9g1906 965 SMART LRR_typ_2 191 214 IPR003591 -
Pvu9g1906 965 SMART LRR_typ_2 312 336 IPR003591 -
Pvu9g1906 965 SMART LRR_typ_2 240 264 IPR003591 -
Pvu9g1906 965 SMART serkin_6 676 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu9g1906 Pvu-Chr9 27179214 27183146 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1906 5 952 Receptor kinase-like Gene Family AT5G07280 32.014 1.54e-133 429
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pvu9g1906 Pkinase 1.3e-43 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1906 - - gmx:100781769 1667.13