Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1906 | ATGAGCCACAAGCTTGTGTATCTCAATCTCTCCCATAATACTCTCGAGGGGGAGTTAAATCTAAAGGGATTGACTCAGTTGCAAACAGTGGACTTGTCTGTTAATAGGTTCCATGGGGAACTTGGGCTGAGTTTCCCTGCCATTTGTGAGAGTTTGGTGACTTTAAATGTTTCAGATAATCACTTGAGGGGTGAGATTCATGGCTTCTTTGATCAATGCTTGAAGCTGCAGTACTTGGATTTGAGCACCAACCATCTAAATGGGACCTTGTGGACTGGATTTTCCAGGCTGAGAGAGTTTTCTATCTCAGAGAATTTTCTAACTGGGGTTGTTCCTCCCCAGGCTTTTCCAGTAAACTGTAGCATTGAAAATCTGGACCTTTCAGTGAATGGATTTGTTGGTAAGGCCCCCAAGGAGTTATCTAACTGCAAGAATTTAGTGGTTCTCAACCTTTCTAGTAACAATTTCACTGGAGATATTCCCCGTGAAATTGGTTCCATTTCTGGTCTTGAGGGATTGTTCTTGGAGAACAATACTTTCTCAAGGGATATCCCAGAGACCCTTTTGACCTTAACCAATTTGTTCATCTTGGATTTGAGCAGAAACAAATTTGGTGGGGAGGTGCAGGAGATTTTTGGGAAATTCAAGCAACTGAAGTTTCTTGTGCTGCACTCAAATTCTTACACTGGAGGGTTAAACTCATCAAGCATATTTACATTGACAAACCTAAGCCGCTTGGACTTAAGCTTTAATAATTTTTCTGGTCCATTACCTGTTGAAATCTCACAAATGTCTGCACTCGCTTTCTTAACCTTAACCTACAACCAGTTCTCTGGACCTATTCCTTCTGAATTAGGAAAGTTGACTCGCCTTATGGCACTTGATCTTGCCTTCAACAGTTTCAGTGGACCGATCCCACCAAGCCTTGGAAACTTGACTTCTCTCTTATGGCTTACACTTTCAGATAATTCATTAACCGGAGAAATCCCACCAGAGTTGGGAAACTGCTCAAGCATGTTATGGCTAAACCTTGCGAACAACAAACTATATGGAAAAATTCCTTCCGATCTAACAAAAATTGGAAGGAATGCAAGGGCCACATTTGAATCAAATCAAAAGAATCTCGGGGGAGTTGTTGCTGGCAATAGTGAGTGCTTAGCAATGAAGAGATGGATACCTGCTGATTACCCTCCGTTCAGCTTTGTGTATAACATCCTGACAAGGAAGAATTGTAGGGCCCTTTGGGACAGGTTGCTCAAAGGATATGGCATCTTCCCCATGTGTACATCTGAGAACTCTGCTAGATCATCACACATAGCAGGGTATCTTCAGCTAAGTGGGAACTATTTGACTGGTGAGATTCCTTCAGAAATTGAGACCATGGTAAACTTTAGCATGTTTCATTTGGGAGATAACAAGTTCACGGGGAAATTCCCTCCAGGGATGGTAGGTTTACCACTTGTAGTCTTGAACATGACCAGAAACAATTTTTCTGGTGAAATTCCAAGTGATATTGGCAACATGAAGTGTTTACAGGACCTTGATTTGTCTAGGAACAATTTCTCTGGAACATTTCCCATAAGTCTGGCACACTTGGATGAGCTTAGCAGGTTCAACATCTCATACAATCCCCTCATATCTGGTACAGTCCCACCATCTGGACACTTACTCACTTTTGACAAGGATTCATATTTGGGTGACCCCCTCTTGAGCCTCCCAAAGTTCTTTAACATCTCTGATGATAGAAATAACACTTTACACAGAGTCTTGAAAAATCCCACAAAATGGTCTTTGGTTTTGGCTCTAGGACTGGCTATCGTGGTCTTTGGACTTCTTTTCCTTGTGATATGTTTCTTGGTGAAAAGTCCATCTGTGGGACCAGGATACCTCATGAAGAATATAAAGAAGCAAACACATGATTCAGGCAGCTCCGGATCCTCACCATGGTATTCTGACACAGTTAAGATATTCCACCTGAACAAGACAGTTTTCACACATGCAGATATCTTGAAAGCAACCTCCAACTTCACAGAGGAGAGAGTCATAGGAAGGGGTGGCTATGGAACAGTATATAGAGGGTCATTTCCAGATGGGAGAGAGGTGGCGGTGAAGAAGCTCCAAAGGGAAGGAACTGAGGGTGAAAAAGAATTCAGAGCTGAAATGAAGGTTCTAAGTGGTCATGGATTTAGCTGGCCTCATCCAAACCTTGTCACACTGTATGGTTGGTGCCTCTATGGTTCACAGAAGATACTCGTTTATGAGTACATAGGAGGTGGAAGCTTGGAGGAACTTGTGACTGATACAAAAAGATTGAGATGGAGAAGGCGCCTAGAAGTGGCAATTGATGTGGCCAGGGCACTTGTCTATTTACACCATGAGTGCTACCCTTCTATTGTGCATAGAGATGTGAAGGCTAGTAACGTGTTGCTAGACAAGAATGGGAATGCCAAGGTCACAGACTTTGGACTTGCTAGAATTGTTGATGTTGGAGACAGTCATGTGAGCACTATAGTGGCTGGCACAGTGGGCTATGTTGCACCAGAATATGGACAAACATGGAAAGCCACCACAAAAGGGGATGTGTACAGTTTTGGGGTGTTGGTTATGGAGCTAGCAACTGGGAGAAGAGCAGTGGATGGAGGGGAAGAGTGTTTGGTGGAATGGACTAGGCGTGTTATGATGGGTTCTGGAAGACAAGGGTTAGCTCAATCTGTACCAGTTTTGTTGAAGGGAAGTGGGGTAGTTGAGGGTGCTAAGGAGATGGGTGACTTGCTCCAAGTTGGAGTGAAATGCACACATGATGCACCACAGGCTAGGCCTAACATGAAGGAGGTTCTTGATATGCTTATTAAGATATATGATCCCACTGGGGACTCAAATTATGGATACCATGTGTAG | 2898 | 0.4327 | MSHKLVYLNLSHNTLEGELNLKGLTQLQTVDLSVNRFHGELGLSFPAICESLVTLNVSDNHLRGEIHGFFDQCLKLQYLDLSTNHLNGTLWTGFSRLREFSISENFLTGVVPPQAFPVNCSIENLDLSVNGFVGKAPKELSNCKNLVVLNLSSNNFTGDIPREIGSISGLEGLFLENNTFSRDIPETLLTLTNLFILDLSRNKFGGEVQEIFGKFKQLKFLVLHSNSYTGGLNSSSIFTLTNLSRLDLSFNNFSGPLPVEISQMSALAFLTLTYNQFSGPIPSELGKLTRLMALDLAFNSFSGPIPPSLGNLTSLLWLTLSDNSLTGEIPPELGNCSSMLWLNLANNKLYGKIPSDLTKIGRNARATFESNQKNLGGVVAGNSECLAMKRWIPADYPPFSFVYNILTRKNCRALWDRLLKGYGIFPMCTSENSARSSHIAGYLQLSGNYLTGEIPSEIETMVNFSMFHLGDNKFTGKFPPGMVGLPLVVLNMTRNNFSGEIPSDIGNMKCLQDLDLSRNNFSGTFPISLAHLDELSRFNISYNPLISGTVPPSGHLLTFDKDSYLGDPLLSLPKFFNISDDRNNTLHRVLKNPTKWSLVLALGLAIVVFGLLFLVICFLVKSPSVGPGYLMKNIKKQTHDSGSSGSSPWYSDTVKIFHLNKTVFTHADILKATSNFTEERVIGRGGYGTVYRGSFPDGREVAVKKLQREGTEGEKEFRAEMKVLSGHGFSWPHPNLVTLYGWCLYGSQKILVYEYIGGGSLEELVTDTKRLRWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKNGNAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWKATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWTRRVMMGSGRQGLAQSVPVLLKGSGVVEGAKEMGDLLQVGVKCTHDAPQARPNMKEVLDMLIKIYDPTGDSNYGYHV* | 966 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1906 | 965 | Gene3D | Ribonuclease Inhibitor | 427 | 585 | IPR032675 | - | |
Pvu9g1906 | 965 | Gene3D | Ribonuclease Inhibitor | 1 | 210 | IPR032675 | - | |
Pvu9g1906 | 965 | SUPERFAMILY | Protein kinase-like (PK-like) | 654 | 950 | IPR011009 | - | |
Pvu9g1906 | 965 | ProSiteProfiles | Protein kinase domain profile. | 676 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu9g1906 | 965 | SUPERFAMILY | L domain-like | 188 | 547 | - | - | |
Pvu9g1906 | 965 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 12 | 956 | - | - | |
Pvu9g1906 | 965 | SUPERFAMILY | L domain-like | 4 | 231 | - | - | |
Pvu9g1906 | 965 | CDD | STKc_IRAK | 682 | 952 | - | - | |
Pvu9g1906 | 965 | Gene3D | Transferase(Phosphotransferase) domain 1 | 757 | 960 | - | - | |
Pvu9g1906 | 965 | Gene3D | Phosphorylase Kinase; domain 1 | 643 | 755 | - | - | |
Pvu9g1906 | 965 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 798 | 810 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu9g1906 | 965 | Gene3D | Ribonuclease Inhibitor | 211 | 384 | IPR032675 | - | |
Pvu9g1906 | 965 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 12 | 956 | - | - | |
Pvu9g1906 | 965 | Pfam | Protein kinase domain | 676 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu9g1906 | 965 | ProSitePatterns | Protein kinases ATP-binding region signature. | 682 | 705 | IPR017441 | GO:0005524 | |
Pvu9g1906 | 965 | SMART | LRR_typ_2 | 191 | 214 | IPR003591 | - | |
Pvu9g1906 | 965 | SMART | LRR_typ_2 | 312 | 336 | IPR003591 | - | |
Pvu9g1906 | 965 | SMART | LRR_typ_2 | 240 | 264 | IPR003591 | - | |
Pvu9g1906 | 965 | SMART | serkin_6 | 676 | 956 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1906 | Pvu-Chr9 | 27179214 | 27183146 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g1906 | 5 | 952 | Receptor kinase-like Gene Family | AT5G07280 | 32.014 | 1.54e-133 | 429 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-2 | Pvu9g1906 | Pkinase | 1.3e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1906 | - | - | gmx:100781769 | 1667.13 |