Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1901 ATGTCCCAAGGATCTCCCCCGCAAGACAACAAAGAACCCTCGCCGGAACCCGATTCGCACAAGGAGGAAGCAACCACCAACACCGCCGCTACCGCCGCCGATGCTGCTCCTCCCGCCCCCACCCGGAACCGCCCCTCTCGCGCCTGTACCATTCGCACGGCTGCACGCCTGTACACGGCGTCGCAGCCGACTAGGCCGAAGGCCGCCAAGAGGGAGACTCGCCGCGAGGAGTCGCCGGCGCCGCCGTCTCCGCAGCCACAGCAATGCGGCAAGATCGTGACGCCGCTGGTAGAACCGCCCTCGCCGGCGCAGTTGCCGCGTTACAACCTCCGGTCCATGTGGGAATTGGCTTCAATACTCAATTTTTTGAATCTTTTTAGGCATCTTTTGAATATTTCAGTAGAATTCTCGGCTGAAGAGTTTGAGACTGCTTTACTCACTCCCAATGACACATTGGGTGATATACATATGCCTTTGCTAAAGGCAATTCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGATAACCGTATTATGCAGAAAATTAAGAGATTGGTGGCACTGGGTTGCGGATGGGGATCTTCCTATTGTTGCTTCACATGGAGTGGAGATTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCAGAAGTTACATTGACAGCTCAATCAAACATGGCATTCCTCTTTCAACATTTCGTAAGGAGCGTATTGGTGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCAAAATATTGGTCATAGGTTGTATCGTGAGATAAGGAAAACTGAGGTGGTTCAAATGAAAAAAGGGAAACCAAGAGGTTCCCAGGTTTTTTCTAATACAACCTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCTGGACGTTTCTGAGAAGCTTTTCACAAGTAAAAACAGAACAGAGGTTTCTGTGGGGAAGAAGGTGAAGATAGACATGCTCCCTGAAATTGAGAAGGTTCACAAGAGAAAGGAGAGGTTGATGAAAAAACAACATAGACAAGCTCTTCTTCTTGATAATTTCTTAGGTGTTGATGGGCTTGCCCTAGGGCGTTCACTACGCGATAGGAAACCTGTTACCTACACTTTCGATGATTATGATCGGTCCATCAATGAGGCAATTAAGATTACCAAACGGAAACCACCATCCCCAGAACTTTTACCGAGGAGAGAAGCAGGATCAAAACCCGAAGCTTTATCGAATGGTAAATGGAGTGGTCCTTCTCCTTCGCATGACCCTCAAGATCTAAATTTTGGCACGCTGTCTCCAAAATCACCAGACTTCGATGATATGGAGGAAGATAATCAAACTGACATACTGGATTTGGATCGAAGCAATCGACGAAGACAGAAGCCTAAACGGTATTCAGAGAAAGAGTTTGTTGAAGCATTGTCAGATAATGAGGCTGACTATGATAGTGATGATGATATTGTGGGAGAAGCCGTGTACTCTGAAGAGTATCTCCAGAAACGCAAGCAGAGAAGGAAGGCTTCTAGTAGCTCTGGCTCAGAAGGAGACGAGGAATATAATTGGAATGAAGATAATGTTGAAGATGAAGAAGAAGATGATGAAGAAGATTCCATGAGTGTCAGTGAGGATAGTGACAAGCCCCGAAAATTCAAGCGACTGGCAGGCCGAACTAGGAGGGAAACTAAACTCAGGTCTGTGGATGAGATTCAATCAGGTCTAAGGCGCAGTAAGAGGGCAACACAAAAACGTATAAATTACCGGCAGTTAGAGATGTCGGATTCAGAAACCGAGTTCATTAAACCTGACAAGTCTAATGCATCAGATGATCACTCCGATCCTACTGAGAATGGAGAGTATATGATGGAAAGTGAAGATTCAGATGGCAACGATGATGAAGAACAAGAAACCAAAGACGTGGAGCCTGTTACTTACCCTGCAGAAGGGAACAACCAATATCCTGCTGTAGAGGAGAATGAACAGAGCCAAATCCAGCCTCCTGAAAAATCTAGTAGTCCAGGTCAGGAGGAAGTTGAGGGCACCACAAAGCGACGTTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTCGATGATGGTCCAAATACAACAACCAAAGATGAAGGCAATGATGATTTGTGA 2202 0.4596 MSQGSPPQDNKEPSPEPDSHKEEATTNTAATAADAAPPAPTRNRPSRACTIRTAARLYTASQPTRPKAAKRETRREESPAPPSPQPQQCGKIVTPLVEPPSPAQLPRYNLRSMWELASILNFLNLFRHLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGVEIEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDSSIKHGIPLSTFRKERIGGDSHGISYWYEDDQNIGHRLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFLDVSEKLFTSKNRTEVSVGKKVKIDMLPEIEKVHKRKERLMKKQHRQALLLDNFLGVDGLALGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPELLPRREAGSKPEALSNGKWSGPSPSHDPQDLNFGTLSPKSPDFDDMEEDNQTDILDLDRSNRRRQKPKRYSEKEFVEALSDNEADYDSDDDIVGEAVYSEEYLQKRKQRRKASSSSGSEGDEEYNWNEDNVEDEEEDDEEDSMSVSEDSDKPRKFKRLAGRTRRETKLRSVDEIQSGLRRSKRATQKRINYRQLEMSDSETEFIKPDKSNASDDHSDPTENGEYMMESEDSDGNDDEEQETKDVEPVTYPAEGNNQYPAVEENEQSQIQPPEKSSSPGQEEVEGTTKRRFLDLNELAPSSGFDDGPNTTTKDEGNDDL* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1901 733 MobiDBLite consensus disorder prediction 608 637 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 468 490 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 579 595 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 406 422 - -
Pvu9g1901 733 PANTHER REMODELING AND SPACING FACTOR 1 18 732 IPR028938 GO:0006355|GO:0031213
Pvu9g1901 733 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 18 732 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 537 560 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 515 532 - -
Pvu9g1901 733 Pfam DDT domain 118 163 IPR018501 -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 431 451 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 638 657 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 673 696 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 406 490 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 1 98 - -
Pvu9g1901 733 MobiDBLite consensus disorder prediction 515 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1901 Pvu-Chr9 27114056 27122503 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pvu9g1901 DDT 3.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1901 - - gmx:100816258 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2011 3 40724134 40731692 Pvu9g1901 9 27114056 27122503 PCT