Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1899 ATGGTGAGGTCTCCTTGTGAAAAAGTCAATGTCAAAAGGGGTGTGTGGACCACAGAAGAAGATACAAAGAAGCTTGCATTTGGCTCCAAGCATGGATCTGGGCTCAAGAGGTGTGGAAAGAGTTGTAGGCTTAGGTGGGCTAACTGCCTCAGGCCTGATCTTAAGCACGACAATTTCACAGCCCAAGAAGAAGATCTAATCATTAAGCTTCACGCAGCCATAGGTAGCAGGTGGTCTATAATAGCCCAACAACTTCCTGGGAGAACAGACAATGATGTAAAGATCTACTGGAACACAAAGCTGAAAAAGAAACTCTCTCAAATGGGGATTGATCCTGTTACCCACAAGCCTTTTTCTAAACTCATTGCTGACTATGGAAACATTGGGGGTTGCCAGAAACCAAGTGCCCGAATAGGGTCTATCAATAAAGAGTTCAAGAGTGCAATGATGCTGAAATCAGAACCCCATCAAACCATGCCACAAGGATTCACAAACATCAATGACCAACCAAAGCTACCACCCCAAATAGAAACCACTGGAAATAACTTTTTATTCAATAGAAACCATGGTGATAACCTCTCAATGGATCTTGTCCAGTTCCAAGCCATACCAAAGGTGTCACGTGCCTCAAACAGCATAGAATTTCAGAACGAGACCATCCCAGGATCTGTGTTTGGAGAAGATCGTTTGTCAAAAACTTCATCACCATCTACTCCTTCTACTTGTTCCACTTCAGCTTTTAGTTGGAATGACTTCCTTCTGGAAGATGCTTTTACACCACTTGATTACCAGGAAAAAGACATCATAGTTTCAAAGAACTTGGTTAGCCAAATAGAGAATGTGGTGACCAGACAGAGTTGGAATAATAAAGAGGTCAAGTCACAAAAGGCCTTAGGTAGTGACTTCCAATTTTCATCATCCTCTGACACTTCATTCATAGAAGCCATGCTTGATCAAGAAAATGAAATGTTTCTAAGTTTTCCTCACCTTATGGAGGAACCATCCAACTTGAGTTAA 1017 0.4189 MVRSPCEKVNVKRGVWTTEEDTKKLAFGSKHGSGLKRCGKSCRLRWANCLRPDLKHDNFTAQEEDLIIKLHAAIGSRWSIIAQQLPGRTDNDVKIYWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIGGCQKPSARIGSINKEFKSAMMLKSEPHQTMPQGFTNINDQPKLPPQIETTGNNFLFNRNHGDNLSMDLVQFQAIPKVSRASNSIEFQNETIPGSVFGEDRLSKTSSPSTPSTCSTSAFSWNDFLLEDAFTPLDYQEKDIIVSKNLVSQIENVVTRQSWNNKEVKSQKALGSDFQFSSSSDTSFIEAMLDQENEMFLSFPHLMEEPSNLS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1899 338 SUPERFAMILY Homeodomain-like 36 109 IPR009057 -
Pvu9g1899 338 SMART sant 12 52 IPR001005 -
Pvu9g1899 338 SMART sant 55 103 IPR001005 -
Pvu9g1899 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Pvu9g1899 338 Pfam Myb-like DNA-binding domain 58 99 IPR001005 -
Pvu9g1899 338 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Pvu9g1899 338 CDD SANT 58 101 IPR001005 -
Pvu9g1899 338 Gene3D - 57 117 - -
Pvu9g1899 338 Gene3D - 6 56 - -
Pvu9g1899 338 PANTHER F14D16.11-RELATED 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1899 Pvu-Chr9 27081666 27083307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1899 1 333 MYB Transcription Factor Family AT3G28470 38.028 2.35e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu9g1899 Myb_DNA-binding 4.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1899 K09422 - gmx:100795381 507.679