Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1890 ATGTCAGCCTCTAGTCATGCAATTGCAAAGGCTGTGGTTGCCACAGCTGGGGCTATGTTACTTATTGCTGCTGTTCTTTTTTACTTCTTTCACAAATTTGTGATTTCTAGATACCGCCAGAGAAACAAAATTGGAGCAAGTTTGCTTCGAGAATCAGGAGTGAACCTTGAGTATATAAACAAAGTTGGTGGCAATGTGAAGGGATTAATTGTTGAAGAAAATGGGGTTGATGTTCTTTATGTGATGGACACAGAAAGAAGACCATTGATAACTGGATTCCAAAATAGTATACTCAATCCAAGTTATGAACACGATGAAGAAGAAAAGAGAATAGATATAATGGTCCACAGGTCCAAAGTATTCAAGCCTGAACTTCCACATGCAAGTGAATCTCCAAGCTTAGTTGGCCATGAGAATCAAGTTAAGCCAGAGTCACAATCACCATCAGTTTCAACATCACTAACACCAAGACAAAACTTGCCACAATCTCCTCAGCTAGCACCTTCACTTCAACCACCACAACAATCTTCACCAATGATTCCTGAGAACAAGAAAACTCAACCACCACCACCTCCTCCTCCTCCAACTCGTCCTCCACCACCACCACCAGGTCCACCTCCACTTCCAAAGGCCAGTGGCTTCATTTCATCCCTGAAACCCCCTCCTGCACCCAAAGGGAAAACAAACATAAGAAGCACTAAAGAGGGTATGGCAGGGGAGAGTTCAAGAGAGAAGGGTGTTGGTCAAACAAGACTGAAGCCTCTACACTGGGATAAGGTTGTAGCAAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCCGGTTTGATGATGAACTAATGGAATCACTCTTTGGATATTCAAGTAGCTATAAAACACAAGATAGAAACAGAACTCTTTCCACTTTGGCCAAGTCCAATTCCAATGCGCCAACTCAAATGTTCATTCTTGACCCAAGGAAATCTCAAAATACTGCCATTGTGTTAAGATCACTTGCCATTTCTCGCAAGGGAATCTTGGATGCTGTCCTTGATGGTCAAGGTCTAAGTGTTGAGACACTTGAAAGACTCACTAAAATAGCTCCCACCAAAGAAGAGGAAGCAAAAATCATCCAATTCAGTGGCAACCCGGATCAGCTTGCTGATGCCGAGTCTTTCCTGTACTACATTCTTAAAGCAGTTCCGACAGCATTCAACCGTTTGAAAGCAATGCTTTTCAGGTCGAGTTATGATTGTGAAGTTCTTCAGCACAAGGAACAGCTACAAACACTTGAAAGAGGTTGCAAGGAACTGAGAACCAGTGGTCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAGGCTGGGAATCGTATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGCTTCAACCTGAGTGCTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCATTTTATAGTAGAACAAGTGGTTCAGTCAGAGGGAAAAAGACAAGCTCTCTATCGAAAGCACACACTTCACATAAGCAATGTTGAAGCAAGCAATGTGAATAGAGCTTATTCATATAGCCTGATGCAACAAGAGGCTGATAAAGAATACACTATGCTTGGTTTGCAAGTGTTAGGTGGGCTAAGTGATGAGTTATCTGAAGCAAAGAAAGCAGCTAGTATTGAGTATCACAATTTGATCACAATGTGTTCCACTCTTAATGCTCATGTTAGTGAAATTAGACAGATTGTAACATGTTGTGGCAACACGGGGAGTGGTGGATTTATCAACGAAATGAAAGGGTTTCTAGAGGAATGTGAGGGAGAACTTGAGGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAAAAAACAAATGATTACTATCTATCAGGAGCATCCAAAGACAACATGGTAAACCCCTTTCAACTGTTTGTTATTATAAAGAATTTTGTTGACATGGTTGGTCAGGCTTGCATAGAACTAAAAAGGAAGGTAGAAAAGAAGAATGTCGGAGGAGAGGCTGTGTCAACAACACCACCTTTGTCGCCATCAAAGAGGACGCCACTCAGATTCCCTAACTTTGATTTGTATTTTCTGTCAAATGTGTCAGAAACTTCATCTTCTAGCCAATCAGAAGATGATTTCTGA 2160 0.4167 MSASSHAIAKAVVATAGAMLLIAAVLFYFFHKFVISRYRQRNKIGASLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVMDTERRPLITGFQNSILNPSYEHDEEEKRIDIMVHRSKVFKPELPHASESPSLVGHENQVKPESQSPSVSTSLTPRQNLPQSPQLAPSLQPPQQSSPMIPENKKTQPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKPPPAPKGKTNIRSTKEGMAGESSREKGVGQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMESLFGYSSSYKTQDRNRTLSTLAKSNSNAPTQMFILDPRKSQNTAIVLRSLAISRKGILDAVLDGQGLSVETLERLTKIAPTKEEEAKIIQFSGNPDQLADAESFLYYILKAVPTAFNRLKAMLFRSSYDCEVLQHKEQLQTLERGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQALYRKHTLHISNVEASNVNRAYSYSLMQQEADKEYTMLGLQVLGGLSDELSEAKKAASIEYHNLITMCSTLNAHVSEIRQIVTCCGNTGSGGFINEMKGFLEECEGELEVVKEEQTRIMELVKKTNDYYLSGASKDNMVNPFQLFVIIKNFVDMVGQACIELKRKVEKKNVGGEAVSTTPPLSPSKRTPLRFPNFDLYFLSNVSETSSSSQSEDDF* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1890 719 MobiDBLite consensus disorder prediction 123 249 - -
Pvu9g1890 719 Pfam Formin Homology 2 Domain 249 658 IPR015425 -
Pvu9g1890 719 SMART it6_source 244 673 IPR015425 -
Pvu9g1890 719 Gene3D Formin, FH2 domain 264 677 IPR042201 -
Pvu9g1890 719 SUPERFAMILY Formin homology 2 domain (FH2 domain) 190 672 - -
Pvu9g1890 719 MobiDBLite consensus disorder prediction 183 210 - -
Pvu9g1890 719 ProSiteProfiles Formin homology-2 (FH2) domain profile. 242 684 IPR015425 -
Pvu9g1890 719 PANTHER FORMIN-LIKE PROTEIN 2 714 - -
Pvu9g1890 719 Coils Coil 418 438 - -
Pvu9g1890 719 Coils Coil 597 617 - -
Pvu9g1890 719 MobiDBLite consensus disorder prediction 133 182 - -
Pvu9g1890 719 PANTHER FORMIN-RELATED 2 714 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1890 Pvu-Chr9 26969712 26972313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1890 8 717 FH2 protein (formin) Gene Family AT1G70140 41.040 1.01e-161 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1890 - - gsj:114409782 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0580 3 7193391 7196321 Pvu9g1890 9 26969712 26972313 ECH
Pvu9g1890 9 26969712 26972313 Pvu9g1890 9 26969712 26972313 ECH