Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1889 ATGTCTGCCGTCGGTGATGTTTTCATTCCGGAAGTGGCTGCGGGGGAGCTACACGTGCTTGCCGTTGACGACAGCCACGTCGACCGCAAGGTTATCGAACGGTTGCTCAAAATCTCGTCTTGCAAAGTGACGGTGGTGGAAAGTGGAAGCAGGGCCCTGCAGTATCTGGGGTTGGATGGAGAGAAGAGCTCCATTGGTTTTGATAGTGTCAAGGTTAATTTGATAATGACAGACTACTCCATGCCGGGGATGACAGGATATGAATTGCTCAAGAAGATAAAGGAATCATCTGTGTTTAGAGAGGTTCCGGTGGTGGTTATGTCGTCTGAGAATATCTTGACACGAATTGATAGTTGCTTGGAGGAAGGAGCAGAAGAGTTTCTGTTGAAACCTGTGAAGTTGTCAGATGTAAAACGCGTGACAGATTTCATCATGAAAGGTGAAGGGAAGAAAAGAGTAAAAAAAAGCCATAAAAGAAGTAGATCAGATGATTGCACCCCTCCATCTATTTCAACTTCATTCTCATCAGTTTCTCATCCATGTGAAGTATCATTGCCTGCATCGCCTTCTACCTTTCACTCAAAGAAATCCAGATTGAGCATATAG 606 0.4488 MSAVGDVFIPEVAAGELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMKGEGKKRVKKSHKRSRSDDCTPPSISTSFSSVSHPCEVSLPASPSTFHSKKSRLSI* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1889 201 MobiDBLite consensus disorder prediction 165 201 - -
Pvu9g1889 201 Pfam Response regulator receiver domain 19 138 IPR001789 GO:0000160
Pvu9g1889 201 ProSiteProfiles Response regulatory domain profile. 18 145 IPR001789 GO:0000160
Pvu9g1889 201 Gene3D - 17 169 - -
Pvu9g1889 201 MobiDBLite consensus disorder prediction 151 201 - -
Pvu9g1889 201 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 13 199 - -
Pvu9g1889 201 SUPERFAMILY CheY-like 16 145 IPR011006 -
Pvu9g1889 201 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 199 IPR045279 GO:0009736
Pvu9g1889 201 SMART REC_2 17 141 IPR001789 GO:0000160
Pvu9g1889 201 CDD REC_typeA_ARR 19 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1889 Pvu-Chr9 26960006 26962365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1889 17 168 Response Regulator Gene Family AT5G62920 74.342 2.14e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu9g1889 Response_reg 7.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1889 K14492 - gmx:100306152 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0579 3 7164501 7165990 Pvu9g1889 9 26960006 26962365 ECH
Pvu9g1889 9 26960006 26962365 Pvu9g1889 9 26960006 26962365 ECH
Pvu3g2029 3 40921022 40923192 Pvu9g1889 9 26960006 26962365 PCT